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Protein Alignment lin-28 and Zcchc13
DIOPT Version :9
Sequence 1: | NP_647983.1 |
Gene: | lin-28 / 38639 |
FlyBaseID: | FBgn0035626 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_083434.1 |
Gene: | Zcchc13 / 75064 |
MGIID: | 1922314 |
Length: | 170 |
Species: | Mus musculus |
Alignment Length: | 120 |
Identity: | 30/120 - (25%) |
Similarity: | 46/120 - (38%) |
Gaps: | 25/120 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 GEQEEVEFECQRTSRGLE-ATRVSSRHGGSCQGSTYRPRINRRTRRMRCYNCGEFANHIASECAL 143
|.:..:..:|.:..|..| ...:.|:.| :..|...|....:||.|||| .||..:|.
Mouse 71 GRRGHIAKDCTQAKREREQCCYICSQPG-------HLARDCNRQEEQKCYTCGEF-GHIQKDCT- 126
Fly 144 GPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSKSIS---NNSSSSAAQEKSEEAT 195
..:|:||....|:..:| |.:..:| ...|...|:|...|||
Mouse 127 ---QIKCYRCGENGHMAVNC---------SKTSEVSCYRCGESGHLARECPIEAT 169
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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