Protein Alignment lin-28 and Ybx2

DIOPT Version :9

• Sequence 1: NP_647983.1
• Gene: lin-28 / 38639
• FlyBaseID: FBgn0035626
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: XP_036012737.1
• Gene: Ybx2 / 53422
• MGIID: 1096372
• Length: 365
• Species: Mus musculus
• Alignment Length: 120
• Identity: 44/120 - (36%)
• Similarity: 63/120 - (52%)
• Gaps: 8/120 - (6%)

  Fly    12 RRTTSQSSTSSANPANLASPTEECGCVR---LGKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQM 73
            |...:|::.:|..||..|....:...:.   ||..|||||..|:||:..||..::|||||:.|:.
Mouse    65 RTPGNQATAASGTPAPPARSQADKPVLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKR 129

  Fly    74 SG----FRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTYRPRINRRTRR 124
            :.    .||:|:.|.|||:.....:|.||..|:...|...:||.|.|. .||.||
Mouse   130 NNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRYAPN-RRRFRR 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-28	NP_647983.1	CSP_CDS	41..101	CDD:239905	27/63 (43%)
Ybx2	XP_036012737.1	CSD	95..164	CDD:278729	29/68 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1278
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810