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Protein Alignment lin-28 and LIN28B
DIOPT Version :9
Sequence 1: | NP_647983.1 |
Gene: | lin-28 / 38639 |
FlyBaseID: | FBgn0035626 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006715540.2 |
Gene: | LIN28B / 389421 |
HGNCID: | 32207 |
Length: | 269 |
Species: | Homo sapiens |
Alignment Length: | 190 |
Identity: | 82/190 - (43%) |
Similarity: | 108/190 - (56%) |
Gaps: | 24/190 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 LERRTTSQSSTSSA----------NPANLASPTEECGCV--RLGKCKWFNVAKGWGFL------- 55
|::|..|.:..||| .|..|..|.||...| ..|.||||||..|:||:
Human 8 LQKRMRSFNQVSSAPGGASKGGGEEPGKLPEPAEEESQVLRGTGHCKWFNVRMGFGFISMINREG 72
Fly 56 TPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTYRPR--- 117
:|.|...:||||||.:.|.|||||.|.|.|||..:::|:|||:.||:...|..|.||..||:
Human 73 SPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSERRPKGKT 137
Fly 118 -INRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSK 176
..|:.:..||||||...:| |.||:|.||||:||.|:...|:.|:||||||.|..::|:
Human 138 LQKRKPKGDRCYNCGGLDHH-AKECSLPPQPKKCHYCQSIMHMVANCPHKNVAQPPASSQ 196
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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