Protein Alignment lin-28 and cnbpa

DIOPT Version :10

• Sequence 1: NP_647983.1
• Gene: lin-28 / 38639
• FlyBaseID: FBgn0035626
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_956043.2
• Gene: cnbpa / 326846
• ZFINID: ZDB-GENE-030131-5045
• Length: 163
• Species: Danio rerio
• Alignment Length: 137
• Identity: 37/137 - (27%)
• Similarity: 56/137 - (40%)
• Gaps: 28/137 - (20%)

  Fly    32 TEEC-GCVRLGKCKWF----NVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQR 91
            |.|| ||.|.|  .|.    |..:|.|  .....|:::|.::          .|||..:..:|::
Zfish     5 TSECFGCGRSG--HWIKNCPNAGRGRG--RGRGRGKDLFCYR----------CGEQGHIARDCEQ 55

  Fly    92 TSRGLEATRVSSRHGGSCQGSTYRPRINRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGE 156
            |    |....:....|........|   ::.|...|||||: |.|:|.:|....:.| |:.|.|.
Zfish    56 T----EDACYNCHRSGHISRDCKEP---KKEREQCCYNCGK-AGHVARDCDHANEQK-CYSCGGF 111

  Fly   157 DHLHADC 163
            .|:...|
Zfish   112 GHIQKLC 118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-28	NP_647983.1	CSP_CDS	41..101	CDD:239905	13/63 (21%)
cnbpa	NP_956043.2	COG5222	<8..>22	CDD:227547	6/15 (40%)
		PTZ00368	40..157	CDD:173561	24/98 (24%)