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Protein Alignment lin-28 and cnbpa
DIOPT Version :9
Sequence 1: | NP_647983.1 |
Gene: | lin-28 / 38639 |
FlyBaseID: | FBgn0035626 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001231665.1 |
Gene: | cnbpa / 326846 |
ZFINID: | ZDB-GENE-030131-5045 |
Length: | 163 |
Species: | Danio rerio |
Alignment Length: | 137 |
Identity: | 37/137 - (27%) |
Similarity: | 56/137 - (40%) |
Gaps: | 28/137 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 TEEC-GCVRLGKCKWF----NVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQR 91
|.|| ||.|.| .|. |..:|.| .....|:::|.:: .|||..:..:|::
Zfish 5 TSECFGCGRSG--HWIKNCPNAGRGRG--RGRGRGKDLFCYR----------CGEQGHIARDCEQ 55
Fly 92 TSRGLEATRVSSRHGGSCQGSTYRPRINRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGE 156
| |....:....|........| ::.|...|||||: |.|:|.:|....:.| |:.|.|.
Zfish 56 T----EDACYNCHRSGHISRDCKEP---KKEREQCCYNCGK-AGHVARDCDHANEQK-CYSCGGF 111
Fly 157 DHLHADC 163
.|:...|
Zfish 112 GHIQKLC 118
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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