DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Blimp-1 and SGR5

DIOPT Version :9

Sequence 1:	NP_001261442.1	Gene:	Blimp-1 / 38638	FlyBaseID:	FBgn0035625	Length:	1216	Species:	Drosophila melanogaster
Sequence 2:	NP_001077868.1	Gene:	SGR5 / 814725	AraportID:	AT2G01940	Length:	446	Species:	Arabidopsis thaliana

Alignment Length:	391	Identity:	85/391 - (21%)
Similarity:	138/391 - (35%)	Gaps:	116/391 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   794 SSHSPFDRQSNASSGAGSATNLHLLQTSTQMLNHPLMQPL-TPLQRLSPLRISPPSSLSPDGNSC 857
            ||..||  .|::.:|. :.||     ||||....   :|. ||......:.:||.:.|..|...|
plant    22 SSSDPF--LSSSENGV-TTTN-----TSTQKRKR---RPAGTPDPDAEVVSLSPRTLLESDRYIC 75

  Fly   858 P--RSGSPLSPNSLASRGYRSLPYPLKKKDG-----KMHYEC--NVC-----CKTFGQLSNLKVH 908
            .  ..|.....|....|....:|:.|.|:|.     |..|.|  ..|     |...|.|..:|.|
plant    76 EICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKH 140

  Fly   909 L-RTHSGERPFKCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQK 972
            . |.||..:.:.|..|:|.:...:. .|.||...|.:.|.|| |  .|.|:..:::.:. |.
plant   141 FRRKHSNHKQWVCERCSKGYAVQSD-YKAHLKTCGTRGHSCD-C--GFFSSFRVESFIE-HQ--- 197

  Fly   973 PYACDLCPQKFTQFVHLKLHKRLHTN-DRPYVCQGCDKKYISASGLRTHWKTTSCKPNNLEEELA 1036
                |.|..           :|:|.. .||      .:..::.....:...:|...|:: |....
plant   198 ----DNCSA-----------RRVHREPPRP------PQTAVTVPACSSRTASTVSTPSS-ETNYG 240

  Fly  1037 MAAAATSECLDKDHPEP-DSREAYEQLTQHMHPAVHPGLRHLSSGGQSPPRLIPLGNHMAPQQQS 1100
            ...|.|:       |:| :.|..:::::..:       |.:.|:......:|:||.::..|.|::
plant   241 GTVAVTT-------PQPLEGRPIHQRISSSI-------LTNSSNNLNLELQLLPLSSNQNPNQEN 291

  Fly  1101 HQQQQQQHQQQGVPPPHLLMTQHSVGPAPMLLTTASQLPPPPPHHQQN----------SPSRLLQ 1155
            .||:.::       |.|                          ||..|          :||...|
plant   292 QQQKVKE-------PSH--------------------------HHNHNHDTTNLNLSIAPSSSYQ 323

  Fly  1156 H 1156
            |
plant   324 H 324

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Blimp-1	NP_001261442.1	SET	133..260	CDD:214614
		C2H2 Zn finger	892..912	CDD:275368	8/27 (30%)
		zf-H2C2_2	904..929	CDD:290200	8/25 (32%)
		C2H2 Zn finger	920..940	CDD:275368	6/19 (32%)
		zf-H2C2_2	932..957	CDD:290200	9/24 (38%)
		C2H2 Zn finger	948..968	CDD:275368	5/19 (26%)
		zf-H2C2_2	960..985	CDD:290200	3/24 (13%)
		C2H2 Zn finger	976..996	CDD:275368	3/19 (16%)
		C2H2 Zn finger	1004..1023	CDD:275368	0/18 (0%)
SGR5	NP_001077868.1	C2H2 Zn finger	75..95	CDD:275368	4/19 (21%)
		C2H2 Zn finger	117..145	CDD:275368	8/27 (30%)
		C2H2 Zn finger	153..172	CDD:275368	6/19 (32%)
		ATP-synt_B	<332..422	CDD:304375
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910