DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Blimp-1 and PRDM1

DIOPT Version :9

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:XP_011534364.1 Gene:PRDM1 / 639 HGNCID:9346 Length:839 Species:Homo sapiens


Alignment Length:1006 Identity:296/1006 - (29%)
Similarity:395/1006 - (39%) Gaps:341/1006 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PHHKLSARRARSRSRSRSPTPDGN---------------------QDYDVTRMREEDFERLAVYL 104
            |.| .||.|.::|..|.: .|..|                     :|.|:|...|.:||....|:
Human    13 PEH-FSAMRGKARDCSEA-APKCNSSTVRFQGLAEGTKGTMKMDMEDADMTLWTEAEFEEKCTYI 75

  Fly   105 VP----DVQAERGLPNRADKTLPRSLTLKSSMVYSTPNVKTEGVWSSGVIPRGTRFGPFEGIPTS 165
            |.    |..|:.|...:|:.:|||:|..|    |:|.:.:..||.|...||:||||||..|   .
Human    76 VNDHPWDSGADGGTSVQAEASLPRNLLFK----YATNSEEVIGVMSKEYIPKGTRFGPLIG---E 133

  Fly   166 NYPND---KNKAR-YFWRV--QGTRHITYGNIKIFKDDDYYYLDGSDRSQSNWMRYVASAYSLSV 224
            .|.||   ||..| ||||:  :|..|              :::||.:..:|||||||..|:|...
Human   134 IYTNDTVPKNANRKYFWRIYSRGELH--------------HFIDGFNEEKSNWMRYVNPAHSPRE 184

  Fly   225 MNLVACQHQENIYFYTTRDILPNEELMVWYCKDFASRLGYDVDPETTIFGACKQAVEAEEEADEE 289
            .||.|||:..||||||.:.|..|:||:||||:|||.||.|....|.|:....:.....::.:.|:
Human   185 QNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPYPGELTMMNLTQTQSSLKQPSTEK 249

  Fly   290 EEEAEGEDGKPRYSMPAPEIPPDVAVSHITYVMGLHLPVGAGNGPANGSVAGSVSGATPPPPTAT 354
            .|.......|..||:  .||                  :...:.|:.|.                
Human   250 NELCPKNVPKREYSV--KEI------------------LKLDSNPSKGK---------------- 278

  Fly   355 PCCRRSSPPAHVSTTTSTCNAHHPHIQHGRHASVIIGQDRSPMASSDKD-----TAGSPLSGLDH 414
                               :.:..:|              ||: :|:||     ..|||      
Human   279 -------------------DLYRSNI--------------SPL-TSEKDLDDFRRRGSP------ 303

  Fly   415 QMTPQDGSVRSVRSDEGYHSNECHEDGLTP-PEDSSDSESEHNYVLDCSKKAIAPKETVIAQAQK 478
            :|......|..:|:               | |||          .|..|......:.|.|.::..
Human   304 EMPFYPRVVYPIRA---------------PLPED----------FLKASLAYGIERPTYITRSPI 343

  Fly   479 PSSSPPAVVMANTTTNSMIS---HSSP--TATPICETDKNEYRKFKVKMPLKYEFKNKTCVKQEP 538
            |||:.|:....::...|:.|   ||||  |.:|: .....|:|.       .|.:.|.:...:  
Human   344 PSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPV-GPGSQEHRD-------SYAYLNASYGTE-- 398

  Fly   539 SLKEVDQEMSLPQEEEEDQVMHPEPDSICPSTTTHLGDEHMLMMERERERERERIQEREPSNQQP 603
            .|........||.          .|.:..||...|                              
Human   399 GLGSYPGYAPLPH----------LPPAFIPSYNAH------------------------------ 423

  Fly   604 ASSTVIVLEHNSGGQARTIVPLSKPYYEPDPPGERYMRFGQPSSSILETILTSQHRLEAAAAAAN 668
                          ..:.::|   ||             |...:.:            :|.::.|
Human   424 --------------YPKFLLP---PY-------------GMNCNGL------------SAVSSMN 446

  Fly   669 ACRQANAATPPPTSPTEMAYSYKKSQRYGNAVSPDSSSNLGQNPEQLSSSAVVVGEQEMTRATMI 733
            ...  |....|...|.           |.|.:...|..:...||..|.||....|.:.:.:    
Human   447 GIN--NFGLFPRLCPV-----------YSNLLGGGSLPHPMLNPTSLPSSLPSDGARRLLQ---- 494

  Fly   734 KGECSPPPPSHHHHNVIFSPSRHAAYLGAGEAGGHSPSPGYP--GYPHYGAAATSTFHSPPHSSH 796
                    |.|...  :..|:.|:|:...|.|.........|  |.|..|.|||:.....|    
Human   495 --------PEHPRE--VLVPAPHSAFSFTGAAASMKDKACSPTSGSPTAGTAATAEHVVQP---- 545

  Fly   797 SPFDRQSNASSGAGSATNLHLLQTSTQMLNHPLMQPLTPLQRLSPLRISPPSSLSPDGNSCPRSG 861
                   .|:|.|.:|      .:|.:.:|                                   
Human   546 -------KATSAAMAA------PSSDEAMN----------------------------------- 562

  Fly   862 SPLSPNSLASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNVCTKS 926
              |..|.....||::|||||||::||:.||||||.||||||||||||||.|||||||||..|.|.
Human   563 --LIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRVHSGERPFKCQTCNKG 625

  Fly   927 FTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKL 991
            ||||||||||:|||||||||:|.:|.||||||||||||||||||:|||.|.:||.||||||||||
Human   626 FTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKL 690

  Fly   992 HKRLHTNDRPYVCQGCDKKYISASGLRTHWK 1022
            ||||||.:||:.|..|.|.||....|:.|.|
Human   691 HKRLHTRERPHKCSQCHKNYIHLCSLKVHLK 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 SET 133..260 CDD:214614 58/132 (44%)
C2H2 Zn finger 892..912 CDD:275368 18/19 (95%)
zf-H2C2_2 904..929 CDD:290200 19/24 (79%)
C2H2 Zn finger 920..940 CDD:275368 14/19 (74%)
zf-H2C2_2 932..957 CDD:290200 19/24 (79%)
C2H2 Zn finger 948..968 CDD:275368 16/19 (84%)
zf-H2C2_2 960..985 CDD:290200 19/24 (79%)
C2H2 Zn finger 976..996 CDD:275368 16/19 (84%)
C2H2 Zn finger 1004..1023 CDD:275368 8/19 (42%)
PRDM1XP_011534364.1 SET 114..220 CDD:214614 56/122 (46%)
COG5048 <584..702 CDD:227381 96/117 (82%)
zf-C2H2 589..611 CDD:278523 20/21 (95%)
C2H2 Zn finger 591..611 CDD:275368 18/19 (95%)
zf-H2C2_2 603..628 CDD:290200 19/24 (79%)
C2H2 Zn finger 619..639 CDD:275368 14/19 (74%)
zf-H2C2_2 631..656 CDD:290200 19/24 (79%)
C2H2 Zn finger 647..667 CDD:275368 16/19 (84%)
zf-H2C2_2 659..684 CDD:290200 19/24 (79%)
C2H2 Zn finger 675..695 CDD:275368 16/19 (84%)
zf-H2C2_2 687..708 CDD:290200 14/20 (70%)
C2H2 Zn finger 703..721 CDD:275368 7/17 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147266
Domainoid 1 1.000 50 1.000 Domainoid score I11770
eggNOG 1 0.900 - - E1_KOG2461
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 393 1.000 Inparanoid score I1988
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D233655at33208
OrthoFinder 1 1.000 - - FOG0006205
OrthoInspector 1 1.000 - - oto89086
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16515
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4128
SonicParanoid 1 1.000 - - X5144
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.980

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