DRSC/TRiP Functional Genomics Resources

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Protein Alignment Blimp-1 and PRDM12

DIOPT Version :10

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:NP_067632.2 Gene:PRDM12 / 59335 HGNCID:13997 Length:367 Species:Homo sapiens


Alignment Length:138 Identity:46/138 - (33%)
Similarity:68/138 - (49%) Gaps:19/138 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   935 KHHLVHTGEKP------HQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLHK 993
            ||...|..:..      .:|.||.:.|:|.|||::|:|:|:..||:.|..|.::|:|...|:.|.
Human   226 KHEDFHPADSAAGPAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHV 290

  Fly   994 RLHTNDRPYVCQGCDKKYISASGLRTHWKTTSCKPNNLEEEL-------------AMAAAATSEC 1045
            ||||.:|||.||.|...|...:|||.|.|:...:|.:...:.             |:||||.:..
Human   291 RLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAA 355

  Fly  1046 LDKDHPEP 1053
            ....|..|
Human   356 AAAAHHLP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 PR-SET_PRDM1 120..262 CDD:380964
zf-C2HE <871..912 CDD:465082
C2H2 Zn finger 892..912 CDD:275368
zf-H2C2_2 904..929 CDD:463886
C2H2 Zn finger 920..940 CDD:275368 2/4 (50%)
SFP1 <938..1020 CDD:227516 34/87 (39%)
C2H2 Zn finger 948..968 CDD:275368 10/19 (53%)
C2H2 Zn finger 976..996 CDD:275368 7/19 (37%)
C2H2 Zn finger 1004..1023 CDD:275368 8/18 (44%)
PRDM12NP_067632.2 PR-SET_PRDM12 84..213 CDD:380973
zf-C2H2 244..265 CDD:395048 10/20 (50%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
zf-H2C2_2 257..282 CDD:463886 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:463886 13/23 (57%)
C2H2 Zn finger 301..319 CDD:275368 8/17 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..337 2/18 (11%)
Blue background indicates that the domain is not in the aligned region.

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