DRSC/TRiP Functional Genomics Resources

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Protein Alignment Blimp-1 and PRDM12

DIOPT Version :9

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:NP_067632.2 Gene:PRDM12 / 59335 HGNCID:13997 Length:367 Species:Homo sapiens


Alignment Length:138 Identity:46/138 - (33%)
Similarity:68/138 - (49%) Gaps:19/138 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   935 KHHLVHTGEKP------HQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLHK 993
            ||...|..:..      .:|.||.:.|:|.|||::|:|:|:..||:.|..|.::|:|...|:.|.
Human   226 KHEDFHPADSAAGPAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHV 290

  Fly   994 RLHTNDRPYVCQGCDKKYISASGLRTHWKTTSCKPNNLEEEL-------------AMAAAATSEC 1045
            ||||.:|||.||.|...|...:|||.|.|:...:|.:...:.             |:||||.:..
Human   291 RLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAA 355

  Fly  1046 LDKDHPEP 1053
            ....|..|
Human   356 AAAAHHLP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 SET 133..260 CDD:214614
C2H2 Zn finger 892..912 CDD:275368
zf-H2C2_2 904..929 CDD:290200
C2H2 Zn finger 920..940 CDD:275368 2/4 (50%)
zf-H2C2_2 932..957 CDD:290200 7/27 (26%)
C2H2 Zn finger 948..968 CDD:275368 10/19 (53%)
zf-H2C2_2 960..985 CDD:290200 10/24 (42%)
C2H2 Zn finger 976..996 CDD:275368 7/19 (37%)
C2H2 Zn finger 1004..1023 CDD:275368 8/18 (44%)
PRDM12NP_067632.2 SET 99..203 CDD:279228
COG5048 244..>294 CDD:227381 21/49 (43%)
zf-C2H2 244..265 CDD:278523 10/20 (50%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..319 CDD:275368 8/17 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..337 2/18 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2461
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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