DRSC/TRiP Functional Genomics Resources

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Protein Alignment Blimp-1 and prdm1b

DIOPT Version :9

Sequence 1:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster
Sequence 2:XP_021323870.1 Gene:prdm1b / 110437762 ZFINID:ZDB-GENE-080618-2 Length:661 Species:Danio rerio


Alignment Length:1048 Identity:290/1048 - (27%)
Similarity:394/1048 - (37%) Gaps:420/1048 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 DVTRMREEDFERLAVYLVPDVQAER--GLPNRADKTLPRSLTLKSSMVYSTPNVKTEGVWSSGVI 150
            |.:...||||.....|:|.|..::.  .|| ||..::||:|    |..|:.....| ||:|...|
Zfish     9 DTSGWTEEDFALNCTYIVQDQSSDPRFSLP-RAMTSIPRNL----SFQYNRDQQVT-GVFSKEYI 67

  Fly   151 PRGTRFGPFEGI--PTSNYPNDKNKARYFWRVQGTRHITYGNIKIFKDDDYYYLDGSDRSQSNWM 213
            |:||||||.:|:  ...|.|...|: :||||:     .:.|.::       :::||.|...||||
Zfish    68 PQGTRFGPLQGVVYTKENVPLHTNR-KYFWRI-----YSGGQLQ-------HFIDGYDVRLSNWM 119

  Fly   214 RYVASAYSLSVMNLVACQHQENIYFYTTRDILPNEELMVWYCKDFASRLGYDVDPETTIFGACKQ 278
            |||..|.||:..||||||:..:|:|||.|.:.|.:||:|||..:|:.||             |.|
Zfish   120 RYVNPARSLAEQNLVACQNGPDIFFYTLRPLEPKQELLVWYSPEFSQRL-------------CGQ 171

  Fly   279 AVEAEEEADEEEEEAEGEDGKPRYSMPAPEIPPDVAVSHITYVMGLHLPVGAGNGPANGSVAGSV 343
            ....:..:.:...:.|.:  ||    |.|:         .||.                      
Zfish   172 QETTDSTSTKYTSDMEYQ--KP----PLPQ---------YTYY---------------------- 199

  Fly   344 SGATPPPPTATPCCRRSSPPAHVSTTTSTCNAHHPHIQHGRHASVIIGQDRSPMASSDKDTAGSP 408
                |..|        |:|..|...|..                    .|..|....|       
Zfish   200 ----PKHP--------SNPQNHPCDTNK--------------------DDEEPEEKID------- 225

  Fly   409 LSGLDHQMTPQDGSVRSVRSDEGYHSNECHEDGLTPPEDSSDSESEHNYVLDCSKKAIAPKETVI 473
                             :..|             ||| |:.|.:     ::|.||| |...|.:.
Zfish   226 -----------------IERD-------------TPP-DTPDEQ-----IMDFSKK-IHKSEPMH 253

  Fly   474 AQAQ-KPSSSPPAVVMANTTTNSMISHSSPTATPICETDKNEYRKFKVKMPLKYEFKNKTCVKQE 537
            .:.. .||.|||..|..:  .:|:..|                              .:..:...
Zfish   254 EKTNIYPSLSPPQDVPLH--LHSLYGH------------------------------REGLISSY 286

  Fly   538 PSLKEVDQEMSLPQEEEEDQVMHPEPDSICPSTTTHLGDEHMLMMERERERERERIQEREPSNQQ 602
            ||::                    .|..:.|....|.  :|||:                     
Zfish   287 PSIR--------------------SPYPLLPQYNPHY--QHMLI--------------------- 308

  Fly   603 PASSTVIVLEHNSGGQARTIVPLSKPYYEPDPPGERYMRFGQPSSSILETILTSQHRLEAAAAAA 667
                                     |.|.|            |.:|:|                 
Zfish   309 -------------------------PPYSP------------PFTSML----------------- 319

  Fly   668 NACRQANAATPPPTSPTEMAYSYKKSQRYGNAVSPDSSSNLGQNPEQLSSSAVVVGEQEMTRATM 732
                        ||.|         :.|||           ..||:.||..::       .::.:
Zfish   320 ------------PTKP---------AHRYG-----------FMNPDGLSYPSI-------PQSGL 345

  Fly   733 IKGECSPPPPSHHHHNVIFSPSRHAAYLGAGEAGGHSPSPGYPGYPHYGAAATSTFHSPPHSSHS 797
            :  ..|.|.|:..|.             |..|.|.::|..|.|..|.     .|...||..:.:|
Zfish   346 L--PVSLPYPNTLHG-------------GLNERGHNTPPRGAPATPE-----LSPQTSPCQTHYS 390

  Fly   798 PFDRQSNASSGAGSATNLHLLQTSTQMLNHPLMQPLTPLQRLSPLRISPPSSLSPDGNSCPRSGS 862
            ..:          .|.||.|               .||       :.:||.|.||          
Zfish   391 ECE----------EAINLSL---------------TTP-------KSTPPPSASP---------- 413

  Fly   863 PLSPNSLASRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNVCTKSF 927
            .:.|      ||:||||||||::||:.||||||.||||||||||||||.|||||||:||:|.|||
Zfish   414 AMIP------GYKSLPYPLKKQNGKIKYECNVCMKTFGQLSNLKVHLRVHSGERPFQCNLCKKSF 472

  Fly   928 TQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCPQKFTQFVHLKLH 992
            |||||||||||||||||||:|.:|.||||||||||||||||||:|||.|.||..||||::|||||
Zfish   473 TQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCGVKFTQYIHLKLH 537

  Fly   993 KRLHTN-DRPYVCQGCDKKYISASGLRTHWKTTSC------KPNNLEEELAMA----AAATSECL 1046
            :|||:: :|.:.|..|.:.:|....||.|.:...|      .|..|.....:.    |:|.:|.|
Zfish   538 RRLHSSRERLHSCAACSRSFIHRFSLRLHQRCGCCPAGRPQAPETLRRAAELLERFDASAEAEAL 602

  Fly  1047 DKDHPEPDSREAYEQ-LTQHMHPAVHPGLRHLSSGGQSPPRLIPLGNHMAPQQQ--------SHQ 1102
            .:...||....|.|: |.:.:......||....:|              .||||        ||:
Zfish   603 PESAAEPQVDAALEEWLARSLQSGEEDGLLRACTG--------------VPQQQDRATVVHFSHR 653

  Fly  1103 QQQQQHQQ 1110
            ...:..::
Zfish   654 SSIKTEEE 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Blimp-1NP_001261442.1 SET 133..260 CDD:214614 53/128 (41%)
C2H2 Zn finger 892..912 CDD:275368 18/19 (95%)
zf-H2C2_2 904..929 CDD:290200 20/24 (83%)
C2H2 Zn finger 920..940 CDD:275368 17/19 (89%)
zf-H2C2_2 932..957 CDD:290200 20/24 (83%)
C2H2 Zn finger 948..968 CDD:275368 16/19 (84%)
zf-H2C2_2 960..985 CDD:290200 19/24 (79%)
C2H2 Zn finger 976..996 CDD:275368 13/19 (68%)
C2H2 Zn finger 1004..1023 CDD:275368 6/18 (33%)
prdm1bXP_021323870.1 SET 52..165 CDD:214614 52/126 (41%)
COG5048 203..>524 CDD:227381 167/628 (27%)
C2H2 Zn finger 437..457 CDD:275368 18/19 (95%)
zf-H2C2_2 449..474 CDD:316026 20/24 (83%)
C2H2 Zn finger 465..485 CDD:275368 17/19 (89%)
zf-H2C2_2 477..502 CDD:316026 20/24 (83%)
C2H2 Zn finger 493..513 CDD:275368 16/19 (84%)
zf-H2C2_2 505..530 CDD:316026 19/24 (79%)
C2H2 Zn finger 521..541 CDD:275368 13/19 (68%)
C2H2 Zn finger 550..569 CDD:275368 6/18 (33%)
ATP-synt_B <581..637 CDD:328740 12/55 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580787
Domainoid 1 1.000 149 1.000 Domainoid score I4402
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D233655at33208
OrthoFinder 1 1.000 - - FOG0006205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16515
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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