DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl2 and adgre5b.3

DIOPT Version :10

Sequence 1:NP_788462.2 Gene:mthl2 / 38636 FlyBaseID:FBgn0035623 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:305 Identity:65/305 - (21%)
Similarity:134/305 - (43%) Gaps:38/305 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 LILPSRTGQTVVMITSLICLVLTIAVYLCVKKLMNLEGKCFICYMMCLFFGYLFLLLDLWELSLD 276
            |::.:|.|    ::.|||||:|.|..:...:.:........:...:|||...|..|..:......
Zfish   466 LVVITRVG----LVLSLICLILCILTFRFCRSIQGTRNSIHLHLSVCLFIADLVFLCGISSTHNQ 526

  Fly   277 FCKA--AGFLGYFFVMAAFFWLSIISRHYWKCLTNPCASMNIRSERAFLLYSCFAWAMPLALTGV 339
            ...|  ||.| :||.::||.|:.:.....::.:.     :...:....|......:.:||.:..:
Zfish   527 VACAIVAGLL-HFFFLSAFCWMLLEGVQLYRMVV-----LVFHTTLKHLYMYAVGYGVPLVIVSI 585

  Fly   340 TYLADNVVNNEEWQPR-VGDEGHCWIYTKSWSAMVYFYGPMVLLILFNITMFVLTAKHIIDSKRT 403
            :.:|         .|: .|.:.|||:..:.:..:.:|. |:.::::.|||:|::|.     .|..
Zfish   586 SAIA---------VPKGYGTDRHCWLSLEGYLILSFFI-PVCIIVILNITVFIITV-----WKLA 635

  Fly   404 LRKIARNEGRIQKLNSDKQNYTQFLLLFTVMGMSWSFEIFSYLVQREKLWVNIFLVADYFNWSQG 468
            |:..:.|.. :.||:..:......:....|:|.||.|..|.:.....::.:.:|::   .|..||
Zfish   636 LKFSSLNPD-LSKLHKIRSFLATAVAQLCVLGGSWVFGFFLFQKNGTEVMLYLFII---LNSLQG 696

  Fly   469 VIIFVLFILRRKTLVLFKKQIF------PKQRAFSRSATQSTIES 507
            .:||::..|..|.:.:..:.:|      .|:..:|.|:|:.:..|
Zfish   697 ALIFIMHCLLSKQVRVEYRSLFMRMCSNKKKGDYSVSSTEPSHSS 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl2NP_788462.2 Methuselah_N 31..211 CDD:429053
7tmB3_Methuselah-like 215..489 CDD:410632 58/276 (21%)
TM helix 1 215..240 CDD:410632 9/24 (38%)
TM helix 2 249..269 CDD:410632 5/19 (26%)
TM helix 3 279..306 CDD:410632 9/28 (32%)
TM helix 4 322..342 CDD:410632 3/19 (16%)
TM helix 5 367..397 CDD:410632 7/29 (24%)
TM helix 6 419..446 CDD:410632 6/26 (23%)
TM helix 7 454..479 CDD:410632 7/24 (29%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..103 CDD:429571
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639
7tm_GPCRs 463..723 CDD:475119 60/285 (21%)
TM helix 1 466..490 CDD:410628 10/27 (37%)
TM helix 2 499..520 CDD:410628 5/20 (25%)
TM helix 3 530..552 CDD:410628 9/22 (41%)
TM helix 4 570..586 CDD:410628 2/15 (13%)
TM helix 5 605..628 CDD:410628 5/23 (22%)
TM helix 6 655..677 CDD:410628 6/21 (29%)
TM helix 7 682..707 CDD:410628 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.

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