DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl2 and mth

DIOPT Version :10

Sequence 1:NP_788462.2 Gene:mthl2 / 38636 FlyBaseID:FBgn0035623 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster


Alignment Length:508 Identity:316/508 - (62%)
Similarity:384/508 - (75%) Gaps:8/508 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MLLSASILIYFLLNLQSSSAEIADCSFYDTVDISEGQRLSNGSYLYEGLLIPAHLTAKYEFKLLA 71
            ::|..|.:|..:|.:|.|.|:|.:|.::||||||..|:|.|||||:||||:||.||.:|:|::|.
  Fly     5 LVLRISTVILVVLVIQKSYADILECDYFDTVDISAAQKLQNGSYLFEGLLVPAILTGEYDFRILP 69

  Fly    72 NGDKEQVPSHVRGCVCKLRTCVRFCCPHDHIMDMGECYANMTTEENELLDPMLNVTLDDGSVVQR 136
            :..|::|..|:|||||||:.|||||||||||||.|.||.||:.||...|||.||||||||||.:|
  Fly    70 DDSKQKVARHIRGCVCKLKPCVRFCCPHDHIMDNGVCYDNMSDEELAELDPFLNVTLDDGSVSRR 134

  Fly   137 HYKKELMVQWDLPKPCDDMFYLDNRDIMDEYTLFENGRLLRHYDQVYLDKSEYCLQHRTFGEGNN 201
            |:|.||:||||||.|||.|||||||:..|:|||||||...||:|:|.|.|.||||||.||.:||.
  Fly   135 HFKNELIVQWDLPMPCDGMFYLDNREEQDKYTLFENGTFFRHFDRVTLRKREYCLQHLTFADGNA 199

  Fly   202 NSIRIIPHNCLILPSRTGQTVVMITSLICLVLTIAVYLCVKKLMNLEGKCFICYMMCLFFGYLFL 266
            .||||.||||||:||.||||||||:||||:||||||||.||||.||.||||||||:|||.|||||
  Fly   200 TSIRIAPHNCLIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYLFL 264

  Fly   267 LLDLWELSLDFCKAAGFLGYFFVMAAFFWLSIISRHYWKCLTNPCASMN-IRSERAFLLYSCFAW 330
            |||||::|:.|||.|||||||||||||||||:||.|.|..........| ...|..||.|:.:||
  Fly   265 LLDLWQISISFCKPAGFLGYFFVMAAFFWLSVISLHLWNTFRGSSHKANRFLFEHRFLAYNTYAW 329

  Fly   331 AMPLALTGVTYLADNVVNNEEWQPRVGDEGHCWIYTKSWSAMVYFYGPMVLLILFNITMFVLTAK 395
            .|.:.|||:|.||||:|.|::|.||||.||||||||::||||:|||||||.||.||||||:||||
  Fly   330 GMAVVLTGITVLADNIVENQDWNPRVGHEGHCWIYTQAWSAMLYFYGPMVFLIAFNITMFILTAK 394

  Fly   396 HIIDSKRTLRKIARNEGRIQKLNSDKQNYTQFLLLFTVMGMSWSFEIFSYLVQREKLWVNIFLVA 460
            .|:..|:.::..|..:.|.||||||||.||.||.||.:||:|||.||.||..|..:.|.|:||||
  Fly   395 RILGVKKDIQNFAHRQERKQKLNSDKQTYTFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVA 459

  Fly   461 DYFNWSQGVIIFVLFILRRKTLVLFKKQIFPKQRAFSRSATQSTIESISQTKR 513
            ||.|||||:|||:||:|:|.|..|.:::..||       :|:|.|.:.|...|
  Fly   460 DYLNWSQGIIIFILFVLKRSTWRLLQERNHPK-------STRSVISNRSMASR 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl2NP_788462.2 Methuselah_N 31..211 CDD:429053 119/179 (66%)
7tmB3_Methuselah-like 215..489 CDD:410632 178/274 (65%)
TM helix 1 215..240 CDD:410632 21/24 (88%)
TM helix 2 249..269 CDD:410632 17/19 (89%)
TM helix 3 279..306 CDD:410632 22/26 (85%)
TM helix 4 322..342 CDD:410632 10/19 (53%)
TM helix 5 367..397 CDD:410632 23/29 (79%)
TM helix 6 419..446 CDD:410632 18/26 (69%)
TM helix 7 454..479 CDD:410632 18/24 (75%)
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 119/179 (66%)
7tmB3_Methuselah-like 219..488 CDD:410632 173/268 (65%)
TM helix 2 247..269 CDD:410632 19/21 (90%)
TM helix 3 277..304 CDD:410632 22/26 (85%)
TM helix 4 321..341 CDD:410632 10/19 (53%)
TM helix 5 367..396 CDD:410632 23/28 (82%)
TM helix 6 418..445 CDD:410632 18/26 (69%)
TM helix 7 453..478 CDD:410632 18/24 (75%)

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