DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl2 and Adgrl3

DIOPT Version :10

Sequence 1:NP_788462.2 Gene:mthl2 / 38636 FlyBaseID:FBgn0035623 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_017454548.1 Gene:Adgrl3 / 170641 RGDID:620836 Length:1580 Species:Rattus norvegicus


Alignment Length:297 Identity:62/297 - (20%)
Similarity:122/297 - (41%) Gaps:36/297 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 VVMITSLICLVLTIAVYLCVKKLMNLEGKCFICYMMCLFFGYLFLLLDLWELSLDF-CKAAGFLG 285
            |.::.||:||::.|..:...:.|.:..........:.||...|..|:.:....... |.....|.
  Rat   945 VGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALL 1009

  Fly   286 YFFVMAAFFWLSIISRHYWKCLTNPCASMNIRSERAFLLYSCFAWAMPLALTGVTYLADNVVNNE 350
            :||.:|||.|:.:.....:..|.....|.:.|.:..:|:    .:.||..:..|:...|      
  Rat  1010 HFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYFYLV----GYGMPALIVAVSAAVD------ 1064

  Fly   351 EWQPRVGDEGHCWIYTKS---WSAMVYFYGPMVLLILFNITMFVLTAKHIIDSKRTLRKIARNEG 412
              ....|.:..||:...:   ||    |.||..|:|:.|:....:....:......|:.   ..|
  Rat  1065 --YRSYGTDKVCWLRLDTYFIWS----FIGPATLIIMLNVIFLGIALYKMFHHTAILKP---ESG 1120

  Fly   413 RIQKLN-SDKQNYTQ-----FLLLFTVMGMSWSFEIFSYLVQREKLWVNIFLVADYFNWSQGVII 471
            .:..:| .|.:.:.:     .:.|..::|::|:|.:. |:.:...:...:|.:   ||..||:.|
  Rat  1121 CLDNINYEDNRPFIKSWVIGAIALLCLLGLTWAFGLM-YINESTVIMAYLFTI---FNSLQGMFI 1181

  Fly   472 FVLF-ILRRKTLVLFKKQIFPKQRAFSRSATQSTIES 507
            |:.. :|::|....:.|.:  :....|..:|:|:|.|
  Rat  1182 FIFHCVLQKKVRKEYGKCL--RTHCCSGKSTESSIGS 1216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl2NP_788462.2 Methuselah_N 31..211 CDD:429053
7tmB3_Methuselah-like 215..489 CDD:410632 57/277 (21%)
TM helix 1 215..240 CDD:410632 6/17 (35%)
TM helix 2 249..269 CDD:410632 4/19 (21%)
TM helix 3 279..306 CDD:410632 7/26 (27%)
TM helix 4 322..342 CDD:410632 4/19 (21%)
TM helix 5 367..397 CDD:410632 8/32 (25%)
TM helix 6 419..446 CDD:410632 5/31 (16%)
TM helix 7 454..479 CDD:410632 8/25 (32%)
Adgrl3XP_017454548.1 Gal_Rha_Lectin_LPHN3 97..194 CDD:438703
OLF 200..456 CDD:128580
HormR 557..621 CDD:214468
GAIN 630..850 CDD:465137
GPS 876..928 CDD:197639
7tmB2_Latrophilin-3 936..1202 CDD:320671 57/281 (20%)
TM helix 1 938..963 CDD:320671 6/17 (35%)
TM helix 2 972..994 CDD:320671 4/21 (19%)
TM helix 3 1003..1030 CDD:320671 7/26 (27%)
TM helix 4 1042..1062 CDD:320671 4/23 (17%)
TM helix 5 1079..1108 CDD:320671 8/32 (25%)
TM helix 6 1124..1160 CDD:320671 7/36 (19%)
TM helix 7 1164..1189 CDD:320671 7/27 (26%)
Latrophilin 1202..1580 CDD:460538 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.

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