DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF3 and AT5G35160

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001190420.1 Gene:AT5G35160 / 833470 AraportID:AT5G35160 Length:658 Species:Arabidopsis thaliana


Alignment Length:680 Identity:209/680 - (30%)
Similarity:315/680 - (46%) Gaps:135/680 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ICLCLLIASCYVSLSQADEHNHKYNDREEVVLWMNTVGPYHNRQ-------ET---YAYFSLPFC 69
            :.:.|:|.|.: .......:.|||.           ||.|.|.:       ||   ::|:|||||
plant    12 LAILLVIQSSF-GFYLPGSYPHKYE-----------VGDYLNVKVNSLTSIETEMPFSYYSLPFC 64

  Fly    70 ---SGQKSSISHYHETLSEALQGVELEFSGYEMEFKSDAPKSVICMV-TLQEESAKAFTYAVKNE 130
               .|.|.|.    |.|.|.|.|..:|.|.|......:..:..:|.. .|..:|.|.....:...
plant    65 KPSEGIKDSA----ENLGELLMGDRIENSPYRFRMFKNESEIFLCQTDKLSADSLKLLKKRIDEM 125

  Fly   131 YWYQMYIDGLPIWGKVGERDERDG----------------KYYIFTHKKFDI------------- 166
            |.....:|.||    .....:|||                .||:|.|.||.:             
plant   126 YQVNPMLDNLP----AIRYTKRDGYVLRWTGYPVGIKVQDVYYVFNHLKFKVLVHKYEEAANVAR 186

  Fly   167 ----------------------GY--------------NGQQIVDITL-----------TTEGRE 184
                                  ||              ||:....:.:           :|....
plant   187 VMGTGDAAEVIPTIGKKDSDVPGYMVVGFEVVPCSFAHNGESTKKLKMYERYTTPIKCDSTRVSM 251

  Fly   185 ELKPGSHINFSYEVNWKPSKVEFKNRFDKYLDPNFFQHRIHWFSIFNSFMMVIFLVGLVSMILMR 249
            .:|.|..|.|||||:::.|.:::.:|:|.||  .....::|||||.||.|::.||.|:|.:|.:|
plant   252 SVKEGQSIVFSYEVSFEESDIKWPSRWDAYL--KMEGSKVHWFSILNSLMVITFLAGIVLVIFLR 314

  Fly   250 TLRKDYARYSKDEEID-DMERDLGDEY-GWKQVHGDVFRSPPNTLLFSALVGAGYQLISVVFCVI 312
            |:|:|..||   ||:| :.:..:.:|. |||.|.|||||:|.|..|...:||.|.|::.:....|
plant   315 TVRRDLTRY---EELDKEAQAQMNEELSGWKLVVGDVFRAPSNASLLCVMVGDGVQILGMAVVTI 376

  Fly   313 MFAIVGELY-TERGSMLSTAIFVYAATSPINGYFGGSLYARLG---GRMWIRQMLVSAFTVPVAV 373
            :||.:|.:. ..||::::..:|.|.......||....|:..:|   .|.|:.....:|...|   
plant   377 LFAALGFMSPASRGTLITGMLFFYMILGIAAGYVSVRLWRTIGCGEHRGWMSVAWKAACFFP--- 438

  Fly   374 CGTAFLI----NFIAIGYHASRAIPFGTMVAVTCICLFVILPLTLVGTVVGRNLDGQPDFPCRVN 434
             |.||||    ||:..|.|::.||||...|.:..:...:.:||||:|...|.... ..:||.|.|
plant   439 -GIAFLILTTLNFLLWGSHSTGAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAP-HIEFPVRTN 501

  Fly   435 AVPRPIPEKKWYMEPLIIVLLG-GVLPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFSILTVVT 498
            .:||.||.:|:   |..:::|| |.||||::|||::||.:|.|..::|||:||:.:|..:|.||.
plant   502 QIPREIPAQKY---PSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFVVLILLVVVC 563

  Fly   499 VCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSIYVYAYSFYYFFFKTK-MFGLFQTAFYFGYMALF 562
            ..|::|.||..|..|||:|.|.||.|:||.:||::.||..|..|..| :.|......|.||....
plant   564 AEVSLVLTYMHLCVEDYKWWWKSFFASGSVAIYIFIYSINYLVFDLKSLSGPVSATLYLGYSLFM 628

  Fly   563 SGALGIICGTVGYVGTNLFVRKIYSNVKID 592
            ..|:.:..||||::.:..||..::|:||:|
plant   629 VLAIMLATGTVGFLSSFWFVHYLFSSVKLD 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 176/563 (31%)
AT5G35160NP_001190420.1 PTZ00189 30..>59 CDD:240309 9/39 (23%)
EMP70 55..610 CDD:397233 181/575 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D641127at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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