DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF3 and Tm9sf1

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001346992.1 Gene:Tm9sf1 / 74140 MGIID:1921390 Length:606 Species:Mus musculus


Alignment Length:605 Identity:208/605 - (34%)
Similarity:328/605 - (54%) Gaps:38/605 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CLCLLIASCYVSLSQAD--EHNHKYNDREEVVLWMNTVGPYHNRQETYAYFSLPFCSGQKSSISH 78
            |.||.:....:.:....  |....|...:.|:|::|.||||||.||||.|:.||.|..:|  |.|
Mouse    12 CHCLPVLILLLGIGHGPWVEGVTHYKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEK--IRH 74

  Fly    79 YHETLSEALQGVELEFSGYEMEFKSDAPKSVICMVTLQEESAKAFTYAVKNEYWYQMYIDGLPIW 143
            ...:|.|.|.|..:..|.||:.|:.:..|.::|.:.|.....:....|::..|:::..:|.|||.
Mouse    75 KSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIR 139

  Fly   144 GKVGERDE-----RDGKYYIFTHKKFDIGYNGQQIVDITLTTEGREELKPGS----------HIN 193
            |.||..:|     ...|..::||..|.:.::|.:|:...::.   .::||.|          .:.
Mouse   140 GFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSV---RDVKPHSLDGLRSDELLGLT 201

  Fly   194 FSYEVNWKPSKVEFKNRFDKYLDPNFFQH--RIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYA 256
            .:|.|.|..:.||.::...:..|..||..  .|||.||.||.::|..|||.|::||||.||.|.|
Mouse   202 HTYSVRWSETSVEHRSDRRRGDDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLA 266

  Fly   257 RYSKDEEI------DDMERDLGDEYGWKQVHGDVFRSPPNTLLFSALVGAGYQLISVVFCVIMFA 315
            ||:.|||.      ||.  |.||. |||.:|.||||.||...|..|::|.|.|.:::...:|:.|
Mouse   267 RYNLDEETSSGGSSDDF--DQGDN-GWKIIHTDVFRFPPYRGLLCAVLGVGAQFLALGTGIIVMA 328

  Fly   316 IVGELYTER-GSMLSTAIFVYAATSPINGYFGGSLYARLGGRMWIRQMLV--SAFTVPVAVCGTA 377
            ::|.....| |::.|.||.:||.|..|:||.....|.::||..|:..:::  |.|:||..:  |.
Mouse   329 LLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWVWNIILTSSLFSVPFFL--TW 391

  Fly   378 FLINFIAIGYHASRAIPFGTMVAVTCICLFVILPLTLVGTVVGRNLDGQPDFPCRVNAVPRPIPE 442
            .::|.:.....:::|:|..|::.:..:.|.|..|||::|.:.|:|.....|.|||...:.|.||.
Mouse   392 SVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPP 456

  Fly   443 KKWYMEPLIIVLLGGVLPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTY 507
            :.||...:|.:.:||.|||.:|.:|:|:||.:.|..:.|.:||.:..||:||..|..|::|..||
Mouse   457 QPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTY 521

  Fly   508 FLLNAEDYRWQWTSFMAAGSTSIYVYAYSFYYFFFKTKMFGLFQTAFYFGYMALFSGALGIICGT 572
            |.|:.|||||.|.|.::.|||.::::.||.:|:..::.|.|..||..:|||..|......::.||
Mouse   522 FQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGT 586

  Fly   573 VGYVGTNLFVRKIYSNVKID 592
            :.:..:..|:|.||.|:|:|
Mouse   587 ISFFSSLKFIRYIYVNLKMD 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 172/495 (35%)
Tm9sf1NP_001346992.1 EMP70 59..562 CDD:367285 175/512 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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