DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TM9SF3 and Tm9sf2

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_542123.3 Gene:Tm9sf2 / 68059 MGIID:1915309 Length:662 Species:Mus musculus


Alignment Length:634 Identity:202/634 - (31%)
Similarity:317/634 - (50%) Gaps:100/634 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KYND-REEVVLWMN------TVGPYHNRQETYAYFSLPFCSGQKSSISHYHETLSEALQGVELEF 94
            |.|: :.::.|::|      :|.||.       |.:..||  |.|......|.|.:.|.|..:|.
Mouse    51 KSNECKADIELFVNRLDSVESVLPYE-------YTAFDFC--QASEGKRPSENLGQVLFGERIEP 106

  Fly    95 SGYEMEFKSDAPKSVICMVTLQEESA---KAFTYAVKN---EYWYQMYIDGLPI-W--------- 143
            |.|:..|.......::|..|...|.|   :...:..|:   .|.:...:|.:|: |         
Mouse   107 SPYKFTFNKKETCKLVCTKTYNTEKAEDKQKLDFLKKSMLLNYQHHWIVDNMPVTWCYEVEDSQK 171

  Fly   144 ---------------GKV-------GERDERDGKYYIFTHKKFDIGYN-------GQQIV----- 174
                           |..       .|..||| .:|||.|....|.|:       |.::|     
Mouse   172 FCNPGFPIGCYITDKGHAKDACVISSEFHERD-TFYIFNHVDIKIYYHVVETGSMGARLVAAKLE 235

  Fly   175 -------------------DITLTTEGREELKPGSHINFSYEVNWKPSK-VEFKNRFDKYLDPNF 219
                               ||:....|  |:|    |.::|.::::..| :.:.:|:|..|:...
Mouse   236 PKSFKHTHIDKPDCSGPAMDISNKASG--EIK----IAYTYSISFEEEKNIRWASRWDYILESMP 294

  Fly   220 FQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKDEEIDDMERDLGDEYGWKQVHGDV 284
            ..| |.||||.||.::|:||.|:|:||::|||.||.|||::.:..:|.:    :|:|||.||||:
Mouse   295 HTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ----EEFGWKLVHGDI 354

  Fly   285 FRSPPNTLLFSALVGAGYQLISVVFCVIMFAIVGELY-TERGSMLSTAIFVYAATSPINGYFGGS 348
            ||.|...:|.|..:|:|.|::.:.|..:.||.:|.|. ..||::::.|:.::.......||....
Mouse   355 FRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAAR 419

  Fly   349 LYARLGGRMWIRQMLVSAFTVPVAVCGTAFLINFIAIGYHASRAIPFGTMVAVTCICLFVILPLT 413
            .|...||..|...:|:::|..|..|....|::|.|..|..:|.||||||:||:..:...:.:|||
Mouse   420 FYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLT 484

  Fly   414 LVGTVVGRNLDGQPDFPCRVNAVPRPIPEKKWYMEPLIIVLLGGVLPFGSIFIEMYFIFTSFWAY 478
            .:|...|...:. .:.|.|.|.:||.|||:.:|.:||..:::||:||||.|||:::||..|.|::
Mouse   485 FIGAYFGFKKNA-IEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSH 548

  Fly   479 KIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSIYVYAYSFYYFFFK 543
            ::||::||:.|||.||.:.....||:..||.|.||||.|||.||:.:|.|::|...|:.:|||.|
Mouse   549 QMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSK 613

  Fly   544 TKMFGLFQTAFYFGYMALFSGALGIICGTVGYVGTNLFVRKIYSNVKID 592
            .::.|...|..||||..:......:..||:|:.....||.||||.||:|
Mouse   614 LQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 171/540 (32%)
Tm9sf2NP_542123.3 EMP70 74..618 CDD:397233 179/565 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

Return to query results.
Submit another query.