DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF3 and Tm9sf1

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_038949417.1 Gene:Tm9sf1 / 361043 RGDID:1307085 Length:606 Species:Rattus norvegicus


Alignment Length:603 Identity:209/603 - (34%)
Similarity:328/603 - (54%) Gaps:36/603 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 CLCLLIASCYVSLSQADEHNHKYNDREEVVLWMNTVGPYHNRQETYAYFSLPFCSGQKSSISHYH 80
            ||.:||....:......|....|...:.|:|::|.||||||.||||.|:.||.|..:|  |.|..
  Rat    14 CLPVLILLLGIGHGPRVEGVTHYKPGDPVILYVNKVGPYHNPQETYHYYQLPVCCPEK--IRHKS 76

  Fly    81 ETLSEALQGVELEFSGYEMEFKSDAPKSVICMVTLQEESAKAFTYAVKNEYWYQMYIDGLPIWGK 145
            .:|.|.|.|..:..|.||:.|:.:..|.::|.:.|.....:....|::..|:::..:|.|||.|.
  Rat    77 LSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGF 141

  Fly   146 VGERDE-----RDGKYYIFTHKKFDIGYNGQQIVDITLTTEGREELKPGS----------HINFS 195
            ||..:|     ...|..::||..|.:.::|.:|:...::.   .::||.|          .:..:
  Rat   142 VGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSV---RDVKPHSLDGLRSDELLGLTHT 203

  Fly   196 YEVNWKPSKVEFKNRFDKYLDPNFFQH--RIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARY 258
            |.|.|..:.||.::...:..|..||..  .|||.||.||.::|..|||.|::||||.||.|.|||
  Rat   204 YSVRWSETSVEHRSDRRRADDGGFFPRTLEIHWLSIINSMVLVFLLVGFVAVILMRVLRNDLARY 268

  Fly   259 SKDEEI------DDMERDLGDEYGWKQVHGDVFRSPPNTLLFSALVGAGYQLISVVFCVIMFAIV 317
            :.|||.      ||.  |.||. |||.:|.||||.||...|..|::|.|.|.:::...:|:.|::
  Rat   269 NLDEETSSGGSSDDF--DQGDN-GWKIIHTDVFRFPPCRGLLCAVLGVGAQFLALGTGIIVMALL 330

  Fly   318 GELYTER-GSMLSTAIFVYAATSPINGYFGGSLYARLGGRMWIRQMLV--SAFTVPVAVCGTAFL 379
            |.....| |::.|.||.:||.|..|:||.....|.::||..|:..:::  |.|:||..:  |..:
  Rat   331 GMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWVWNIILTTSLFSVPFFL--TWSV 393

  Fly   380 INFIAIGYHASRAIPFGTMVAVTCICLFVILPLTLVGTVVGRNLDGQPDFPCRVNAVPRPIPEKK 444
            :|.:.....:::|:|..|::.:..:.|.|..|||::|.:.|:|.....|.|||...:.|.||.:.
  Rat   394 VNSVHWANGSTQALPVTTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPCRTKNIAREIPPQP 458

  Fly   445 WYMEPLIIVLLGGVLPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFL 509
            ||...:|.:.:||.|||.:|.:|:|:||.:.|..:.|.:||.:..||:||..|..|::|..|||.
  Rat   459 WYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLSVGACISIALTYFQ 523

  Fly   510 LNAEDYRWQWTSFMAAGSTSIYVYAYSFYYFFFKTKMFGLFQTAFYFGYMALFSGALGIICGTVG 574
            |:.|||||.|.|.::.|||.::::.||.:|:..::.|.|..||..:|||..|......::.||:.
  Rat   524 LSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTIS 588

  Fly   575 YVGTNLFVRKIYSNVKID 592
            :..:..|:|.||.|:|:|
  Rat   589 FFSSLKFIRYIYVNLKMD 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 172/495 (35%)
Tm9sf1XP_038949417.1 EMP70 59..562 CDD:397233 175/512 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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