DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF3 and TM9SF2

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster


Alignment Length:639 Identity:195/639 - (30%)
Similarity:319/639 - (49%) Gaps:112/639 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 REEVVLWMNTVGPYHNRQET---YAYFSLPFCSG--QKSSISHYHETLSEALQGVELEFSGYEME 100
            :.|::|::|.:    |.:|:   |.|....||.|  |.|.:    |.|.:.:.|..:....|:::
  Fly    46 KSEILLYVNRL----NTEESVIPYEYHHFDFCLGEEQNSPV----ENLGQVVFGERIRPGPYKIQ 102

  Fly   101 F--------------KSDAPKSVICMVTLQEESAKAFTYAVKNEYWYQMYIDGLPI-W------G 144
            |              |.|.|.|...|:.|::        .:...|.:...:|.:|: |      |
  Fly   103 FLENQQCATTCVKTYKGDDPASNRRMMVLKK--------GISLNYQHHWIVDNMPVTWCYPLENG 159

  Fly   145 K--------VGERDERDGK-------------YYIFTHKKFDIGY-------------NGQQIVD 175
            |        :|.....||:             ||.|.|...:|.|             |..:|:.
  Fly   160 KQYCGIGFPMGCLVRSDGEGCPINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIIS 224

  Fly   176 ITLT----------------TE----GREELKPGSHIN--FSYEVNW-KPSKVEFKNRFDKYLDP 217
            :.:|                ||    ....||.|..:.  ::|.|.: |...:::.:|:| |:..
  Fly   225 VKVTPKSIKHTDKENPNCLSTEPLAISENSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWD-YILE 288

  Fly   218 NFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKDEEIDDMERDLGDEYGWKQVHG 282
            :.....|.||||.||.::|:||.|:|:||::|||.||.|||::.:..:|.:    :|:|||.|||
  Fly   289 SMPHTNIQWFSILNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSGEDAQ----EEFGWKLVHG 349

  Fly   283 DVFRSPPNTLLFSALVGAGYQLISVVFCVIMFAIVGELY-TERGSMLSTAIFVYAATSPINGYFG 346
            ||||.|...:|.|..:|:|.|::.:....:.||.:|.|. ..||::::.::.::.:.....||..
  Fly   350 DVFRPPRKGMLLSVFLGSGVQVLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVS 414

  Fly   347 GSLYARLGGRMWIRQMLVSAFTVPVAVCGTAFLINFIAIGYHASRAIPFGTMVAVTCICLFVILP 411
            ..:|...||..|...:::::...|..|....|::|.:..|.::|.|:||.|::|:..:...|.:|
  Fly   415 ARIYKSFGGLKWKSNVILTSIVCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVP 479

  Fly   412 LTLVGTVVG---RNLDGQPDFPCRVNAVPRPIPEKKWYMEPLIIVLLGGVLPFGSIFIEMYFIFT 473
            ||.||...|   |.|    :.|.|.|.:||.||::..|.:|:..:::|||||||.|||:::||.:
  Fly   480 LTFVGAYFGFRKRAL----EHPVRTNQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILS 540

  Fly   474 SFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSIYVYAYSFY 538
            |.|:.:|||::||:.|||.||.:.....||:..||.|.||||.|.|.||:.:|.|::|::.|..:
  Fly   541 SLWSSQIYYMFGFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCH 605

  Fly   539 YFFFKTKMFGLFQTAFYFGYMALFSGALGIICGTVGYVGTNLFVRKIYSNVKID 592
            ||..|..:.....|..||||.|:......::.||:|:.....|:|||||.||:|
  Fly   606 YFVTKLSIKDSASTFLYFGYTAIMVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 167/556 (30%)
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 172/569 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461659
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10766
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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