DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF3 and Tm9sf2

DIOPT Version :10

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001005554.1 Gene:Tm9sf2 / 306197 RGDID:1359230 Length:663 Species:Rattus norvegicus


Alignment Length:634 Identity:203/634 - (32%)
Similarity:318/634 - (50%) Gaps:100/634 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KYND-REEVVLWMN------TVGPYHNRQETYAYFSLPFCSGQKSSISHYHETLSEALQGVELEF 94
            |.|: :.|:.|::|      :|.||.       |.:..||  |.|......|.|.:.|.|..:|.
  Rat    52 KSNECKAEIELFVNRLDSVESVLPYE-------YTAFDFC--QASEGKRPSENLGQVLFGERIEP 107

  Fly    95 SGYEMEFKSDAPKSVICMVTLQEESA---KAFTYAVKN---EYWYQMYIDGLPI-W--------- 143
            |.|:..|..:....::|..|...|.|   :...:..|:   .|.:...:|.:|: |         
  Rat   108 SPYKFTFNKEETCKLVCTKTYHTEKAEDKQKLDFLKKSMLLNYQHHWIVDNMPVTWCYEVEDNQK 172

  Fly   144 ---------------GKV-------GERDERDGKYYIFTHKKFDIGYN-------GQQIV----- 174
                           |..       .|..||| .:|||.|....|.|:       |.::|     
  Rat   173 FCNPGFPIGCYITDKGHAKDACVISSEFHERD-TFYIFNHVDIKIQYHVVETGSMGARLVAAKLE 236

  Fly   175 -------------------DITLTTEGREELKPGSHINFSYEVNWKPSK-VEFKNRFDKYLDPNF 219
                               ||:....|  |:|    |.::|.::::..| :.:.:|:|..|:...
  Rat   237 PKSFRHTHIDKPDCSGPAMDISNKASG--EIK----IAYTYSISFEEEKNIRWASRWDYILESMP 295

  Fly   220 FQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKDEEIDDMERDLGDEYGWKQVHGDV 284
            ..| |.||||.||.::|:||.|:|:||::|||.||.|||::.:..:|.:    :|:|||.||||:
  Rat   296 HTH-IQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYNQMDSTEDAQ----EEFGWKLVHGDI 355

  Fly   285 FRSPPNTLLFSALVGAGYQLISVVFCVIMFAIVGELY-TERGSMLSTAIFVYAATSPINGYFGGS 348
            ||.|...:|.|..:|:|.|::.:.|..:.||.:|.|. ..||::::.|:.::.......||....
  Rat   356 FRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAAR 420

  Fly   349 LYARLGGRMWIRQMLVSAFTVPVAVCGTAFLINFIAIGYHASRAIPFGTMVAVTCICLFVILPLT 413
            .|...||..|...:|:::|..|..|....|::|.|..|..:|.||||||:||:..:...:.:|||
  Rat   421 FYKSFGGEKWKTNVLLTSFLCPGIVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLT 485

  Fly   414 LVGTVVGRNLDGQPDFPCRVNAVPRPIPEKKWYMEPLIIVLLGGVLPFGSIFIEMYFIFTSFWAY 478
            .:|...|...:. .:.|.|.|.:||.|||:.:|.:||..:::||:||||.|||:::||..|.|::
  Rat   486 FIGAYFGFKKNA-IEHPVRTNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSH 549

  Fly   479 KIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSIYVYAYSFYYFFFK 543
            ::||::||:.|||.||.:.....||:..||.|.||||.|||.||:.:|.|::|...|:.:|||.|
  Rat   550 QMYYMFGFLFLVFIILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSK 614

  Fly   544 TKMFGLFQTAFYFGYMALFSGALGIICGTVGYVGTNLFVRKIYSNVKID 592
            .::.|...|..||||..:......:..||:|:.....||.||||.||:|
  Rat   615 LQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:460774 171/540 (32%)
Tm9sf2NP_001005554.1 EMP70 75..619 CDD:460774 179/565 (32%)

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