DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TM9SF3 and Y41D4A.4

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:NP_001368302.1 Gene:Y41D4A.4 / 176983 WormBaseID:WBGene00021506 Length:589 Species:Caenorhabditis elegans


Alignment Length:535 Identity:361/535 - (67%)
Similarity:429/535 - (80%) Gaps:5/535 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RAICLCLLIASCYVSLSQADEHNHKYNDREEVVLWMNTVGPYHNRQETYAYFSLPFCSGQKSSIS 77
            |.:...||..|..|   :||||:|.|...|||||||||||||.||||||.|||||||.|:|..|.
 Worm     2 RVLISLLLFTSLLV---EADEHDHLYEVDEEVVLWMNTVGPYSNRQETYTYFSLPFCKGEKKEIG 63

  Fly    78 HYHETLSEALQGVELEFSGYEMEFKSDAPKSVICMVTLQEESAKAFTYAVKNEYWYQMYIDGLPI 142
            |||||:.|:|.||||||||.:::|:::..|:|:|...|.|...|...||::|.|:||||:|.:||
 Worm    64 HYHETMGESLLGVELEFSGLDIKFRTNTKKTVVCEKKLTETDYKTLLYAIQNSYYYQMYLDDMPI 128

  Fly   143 WGKVGERDE--RDGKYYIFTHKKFDIGYNGQQIVDITLTTEGREELKPGSHINFSYEVNWKPSKV 205
            ||.|||.|.  ....|.::|||:.|||||.:|:||:.|||:||.:::||:.:.|:|||.|..|:|
 Worm   129 WGMVGEIDNTVNPPAYKLYTHKRLDIGYNDKQVVDVNLTTDGRVDIRPGAELTFTYEVQWSKSEV 193

  Fly   206 EFKNRFDKYLDPNFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKDEEIDDMERD 270
            :|..||||||||:||||||||||||||||||:||||||.|||:||||||||||.|::.:||::.|
 Worm   194 DFTKRFDKYLDPSFFQHRIHWFSIFNSFMMVVFLVGLVWMILVRTLRKDYARYQKEDSLDDLDAD 258

  Fly   271 LGDEYGWKQVHGDVFRSPPNTLLFSALVGAGYQLISVVFCVIMFAIVGELYTERGSMLSTAIFVY 335
            ||||||||||||||||.|...||||:.:||||.:.:|.....:.|||||.||||||:||.|||||
 Worm   259 LGDEYGWKQVHGDVFRPPSMPLLFSSCIGAGYHVFTVAVITTILAIVGEFYTERGSLLSAAIFVY 323

  Fly   336 AATSPINGYFGGSLYARLGGRMWIRQMLVSAFTVPVAVCGTAFLINFIAIGYHASRAIPFGTMVA 400
            ||.||:|||.|||:|||.|||.||:|||:.||.:|..|||.|||||||||.|||||||||..|:|
 Worm   324 AACSPVNGYAGGSMYARFGGRHWIKQMLLGAFLLPSMVCGVAFLINFIAIYYHASRAIPFTIMLA 388

  Fly   401 VTCICLFVILPLTLVGTVVGRNLDGQPDFPCRVNAVPRPIPEKKWYMEPLIIVLLGGVLPFGSIF 465
            |:.|||||||||||||||:|||:.|..|:||||||||||||:|||:::|.:|.|.||||||||||
 Worm   389 VSAICLFVILPLTLVGTVIGRNMAGSADYPCRVNAVPRPIPDKKWFVQPWLITLAGGVLPFGSIF 453

  Fly   466 IEMYFIFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRWQWTSFMAAGSTSI 530
            |||||||||||||||||||||||||..||::|||||||||:|||||||||||:||||....||:.
 Worm   454 IEMYFIFTSFWAYKIYYVYGFMLLVTIILSIVTVCVTIVCSYFLLNAEDYRWRWTSFACGASTAF 518

  Fly   531 YVYAYSFYYFFFKTK 545
            |||.||.||||||||
 Worm   519 YVYMYSMYYFFFKTK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 320/471 (68%)
Y41D4A.4NP_001368302.1 EMP70 47..533 CDD:397233 330/485 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165222
Domainoid 1 1.000 721 1.000 Domainoid score I41
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10588
Inparanoid 1 1.050 772 1.000 Inparanoid score I271
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 1 1.000 - - FOG0005862
OrthoInspector 1 1.000 - - oto19143
orthoMCL 1 0.900 - - OOG6_104089
Panther 1 1.100 - - LDO PTHR10766
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4192
SonicParanoid 1 1.000 - - X4863
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.