DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TM9SF3 and tm9sf1

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_002939067.1 Gene:tm9sf1 / 100486536 XenbaseID:XB-GENE-992446 Length:589 Species:Xenopus tropicalis


Alignment Length:595 Identity:201/595 - (33%)
Similarity:334/595 - (56%) Gaps:34/595 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LCLLIASCYVSLSQADEHNHKYNDREEVVLWMNTVGPYHNRQETYAYFSLPFCSGQKSSISHYHE 81
            ||:.:    |:.|.|...| :|...:.|::::|.||||||.||||.|:.||.|:.::  |.|...
 Frog    10 LCVWL----VAPSPATGDN-RYKPGDPVMMYVNKVGPYHNPQETYHYYQLPVCAPEQ--IRHKSL 67

  Fly    82 TLSEALQGVELEFSGYEMEFKSDAPKSVICMVTLQEESAKAFTYAVKNEYWYQMYIDGLPIWGKV 146
            ||.|.|.|..:..|.|.:.|:.:..:..:|.:.|.....:....|::..|:::..:|.:||.|.:
 Frog    68 TLGEVLDGDRMAESMYRITFRQNVERQTLCEMKLSLSQVEELRRAIEELYYFEFVLDDIPIRGFL 132

  Fly   147 GERDE-----RDGKYYIFTHKKFDIGYNGQQIVDITLTTEGREELKPGS--------HINFSYEV 198
            |..:|     ...|..::.|...:|.||..:|:...::.   .::||.|        .:..:|.:
 Frog   133 GYMEESGFLPHTHKIGLWAHLDINIEYNDDRIIYSNVSV---RDVKPFSLDDVRETLSLTHTYSI 194

  Fly   199 NWKPSKVEFKNRFDKYLDPNFFQH--RIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKD 261
            :|.||.|.::.|.|:..|.:||..  .|||.||.||.::|..|:|.|.:||||.|:.|.|||:.|
 Frog   195 HWFPSTVTYERRGDRLRDSSFFPKSLEIHWLSIINSMVLVFLLLGFVVIILMRVLKSDLARYNLD 259

  Fly   262 EE-IDDMERDLGDEYGWKQVHGDVFRSPPNTLLFSALVGAGYQLISVVFCVIMFAIVGELYTER- 324
            || .||||:  ||. |||.:|.||||.||...|..|::|.|:|.:::...:|:..::|.....| 
 Frog   260 EEGADDMEQ--GDN-GWKIIHTDVFRFPPYRSLLCAVLGVGFQFLALGTGIIVMVLLGLFNVHRH 321

  Fly   325 GSMLSTAIFVYAATSPINGYFGGSLYARLGGRMWIRQMLV--SAFTVPVAVCGTAFLINFIAIGY 387
            |::.|.||.:||.|..::||...:.|.:|||..|:..:::  |.|:.|..:  |..::|.:....
 Frog   322 GAINSAAILLYALTCCVSGYVSSNFYRQLGGDRWVWNIVLTTSLFSAPFFL--TWSVVNSVHWAN 384

  Fly   388 HASRAIPFGTMVAVTCICLFVILPLTLVGTVVGRNLDGQPDFPCRVNAVPRPIPEKKWYMEPLII 452
            .:::|:|..|::.:..:.|.|..|||::|.:.|:|.....:.|||...:.|.||.:.||....:.
 Frog   385 GSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNSAVNFEAPCRTKNIAREIPRQPWYKSAPVH 449

  Fly   453 VLLGGVLPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLNAEDYRW 517
            :.:||.|||.:|.:|:|:||.:.|..:.|.:||.:.:||:||..|..|:::..|||.|:.|||||
 Frog   450 MAIGGFLPFSAISVELYYIFATVWGREQYTLYGILFIVFAILLSVGACISVALTYFQLSGEDYRW 514

  Fly   518 QWTSFMAAGSTSIYVYAYSFYYFFFKTKMFGLFQTAFYFGYMALFSGALGIICGTVGYVGTNLFV 582
            .|.|.::.|||..:::.||.:|::.::.|.|:.||..:|||..|.:....::.|.|.:..:..|:
 Frog   515 WWRSVLSTGSTGAFIFLYSVFYYWRRSNMSGVVQTVEFFGYSFLTAYVFFLMLGAVSFTASLRFI 579

  Fly   583 RKIYSNVKID 592
            |.||.|:|:|
 Frog   580 RYIYINLKMD 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 164/488 (34%)
tm9sf1XP_002939067.1 EMP70 48..546 CDD:281048 168/507 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.