DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF3 and tm9sf4

DIOPT Version :9

Sequence 1:NP_647979.1 Gene:TM9SF3 / 38635 FlyBaseID:FBgn0035622 Length:592 Species:Drosophila melanogaster
Sequence 2:XP_031750207.1 Gene:tm9sf4 / 100379964 XenbaseID:XB-GENE-993565 Length:642 Species:Xenopus tropicalis


Alignment Length:601 Identity:209/601 - (34%)
Similarity:326/601 - (54%) Gaps:77/601 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QETYAYFSLPFCSGQKSSISHYHETLSEALQGVELEFSGYEMEFKSDAPKSVIC-----MVTLQE 117
            |..|.|:|||||  |.:.|::..|.|.|.|:|..:..:.:.:...||....|:|     ...|..
 Frog    53 QLPYEYYSLPFC--QPTEIAYKSENLGEVLRGDRIVNTPFRVLMNSDKKCEVLCGGPRQSHVLTV 115

  Fly   118 ESAKAFTYAVKNEYWYQMYIDGLPIWGKVG-----ERDER------------------DGKYYIF 159
            |.:|.....::.:|:..:..|.||:..::.     |.:|:                  :.|:|:.
 Frog   116 EQSKLVAERIREDYYVHLIADNLPVATRLDLYLNREEEEKKKEKDVQFEHGYRLGFIDNNKFYLH 180

  Fly   160 THKKFDIGYNGQQI----------------------VDITLTTEG-----------REELKPG-- 189
            .|..|.:.|:.::|                      .|:..|.:|           .:|:.|.  
 Frog   181 NHLSFYLYYHPEEIEEKQEPTFRVVRFEVIPQSIRLEDLKGTDQGLCTVPDSSSSAPQEIDPSKE 245

  Fly   190 SHINFSYEVNWKPSKVEFKNRFDKYLDPNFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKD 254
            :.|.|:|.|:|:.|.:::.:|:|.||..:..|  ||||||.||.::|.||.|::|||::||||||
 Frog   246 NKIIFTYSVHWQESDIKWASRWDTYLTMSDVQ--IHWFSIINSVVVVFFLSGILSMIIIRTLRKD 308

  Fly   255 YARYSKDEEIDD-MERDLGDEYGWKQVHGDVFRSPPNTLLFSALVGAGYQLISVVFCVIMFAIVG 318
            .|.|:|:::|:| ||     |.|||.|||||||.|...::.|:|:|:|.||..::..||..|::|
 Frog   309 IANYNKEDDIEDTME-----ESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVIFVAMLG 368

  Fly   319 ELY-TERGSMLSTAIFVYAATSPINGYFGGSLYARLGGRMWIRQMLVSAFTVPVAVCGTAFLINF 382
            .|. :.||::::||.|::.......|:|.|.||..|.|..|.:....:|...|..|....|::|.
 Frog   369 MLSPSSRGALMTTACFLFMFMGVFGGFFAGRLYRTLKGHRWRKGAFCTATLYPGVVFAICFVLNC 433

  Fly   383 IAIGYHASRAIPFGTMVAVTCICLFVILPLTLVGTVVGRNLDGQP-DFPCRVNAVPRPIPEKKWY 446
            ...|.|:|.|:||.||||:.|:...:.|||..:|...|  ...|| |.|.|.|.:||.|||::||
 Frog   434 FIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFG--FRKQPYDNPVRTNQIPRQIPEQRWY 496

  Fly   447 MEPLIIVLLGGVLPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFSILTVVTVCVTIVCTYFLLN 511
            |:..:.:|:.|:||||::|||::|||::.|..:.||::||:.|||.||.|....::||..||.|.
 Frog   497 MKRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLC 561

  Fly   512 AEDYRWQWTSFMAAGSTSIYVYAYSFYYFFFKTKMFGLFQTAFYFGYMALFSGALGIICGTVGYV 576
            ||||||.|.:|:.:|.::.||..|:.:||..|..:.....:..||||..|...:..::.||:|:.
 Frog   562 AEDYRWWWRTFLVSGGSAFYVLIYAVFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFY 626

  Fly   577 GTNLFVRKIYSNVKID 592
            ...:|:||||:.||||
 Frog   627 AAYMFIRKIYAAVKID 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF3NP_647979.1 EMP70 60..530 CDD:281048 185/535 (35%)
tm9sf4XP_031750207.1 EMP70 55..599 CDD:397233 191/554 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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