DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp9 and phu

DIOPT Version :9

Sequence 1:NP_001286944.1 Gene:Alp9 / 38633 FlyBaseID:FBgn0035620 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_649897.4 Gene:phu / 41135 FlyBaseID:FBgn0043791 Length:546 Species:Drosophila melanogaster


Alignment Length:544 Identity:254/544 - (46%)
Similarity:342/544 - (62%) Gaps:46/544 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LSLKFWIRLGLLTVVWGAAVPGRAPVD-EERMHP----------------HLPTSPRL---RTIS 46
            :.|:.:..|||..:|.|    |.:..| |.||||                :....|::   ...|
  Fly     1 MRLQLFFFLGLSVLVSG----GESSHDAERRMHPVFSLMGTGSNPIGGGRYKRAMPQIVFDAVRS 61

  Fly    47 GEETQEFWHSASKKLIREKLE--FVRNTKKAKNIILFLGDGMGLATLAAARSYIGGEELKLSFEE 109
            .|...|:|...:.:.:.::||  ...||:.|:|::||:||||.:.|:.|.|.|:||||.:.:||:
  Fly    62 EERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIGDGMSIPTITAGRVYLGGEEKQFAFEQ 126

  Fly   110 FPFTGLSKTYSVDKIVPDSACTSTSYLCGVKANYGTIGVNAHVKRGDCAAMANETNHVFSLGKWA 174
            ||:.||||||..:..|.|||||:|:||.|||||||||||:|.|:..||.|.|...:||.|:..||
  Fly   127 FPYVGLSKTYCANMQVADSACTATAYLGGVKANYGTIGVSAAVQFKDCQAQAQAAHHVSSIAAWA 191

  Fly   175 MDAGKAAGLVTTTRVTHASPSGVYAHVADREWENNAVLEEACGELSDG--LQDIAVQLIHGEVGS 237
            ...|.|.||||||.||||||:|||||:|:|.|||:|   |..|:..|.  ..|.|.|||:..||.
  Fly   192 QKQGMATGLVTTTSVTHASPAGVYAHLANRNWENDA---EVVGDNGDPDLCPDAAAQLINSPVGQ 253

  Fly   238 KLKVMLGGGKRSFYSPEHYDK----GRRTDGRNLVEEFEALDAGNT-FVKTQKKLLNVNATETGR 297
            ||.|::|||:.:|......|.    |||.|||||::|::.....:. :|:.:::|||: :..|.|
  Fly   254 KLNVIMGGGRENFLPKGVTDSSGAPGRRLDGRNLIDEWKNQHTNSAQYVENRRELLNL-SNHTSR 317

  Fly   298 LLGLFSKSHMHYHLEQLADPDNNEPTLEEMTQKAIEVLETEE--QGYFLFVEGGKIDISHHETMA 360
            :||||:..||.|||:  |.| ..:||||||.|.|:|:||.:.  :|||||||||:||..||:|:|
  Fly   318 VLGLFAPYHMAYHLD--ASP-AEQPTLEEMVQSAMEILERQSAGRGYFLFVEGGRIDHGHHDTLA 379

  Fly   361 RIALDETAELSKAVKKAREMTNPEETLIVVTSDHSHTFSVSGYQPRGSDIFGAAKAN-GKDGKPY 424
            ..|:|||||..|||:.||..|:.::|||||:||||||.|::||..|.:||||..... ..|..||
  Fly   380 LRAIDETAEFDKAVRFARSHTSTDDTLIVVSSDHSHTMSLAGYSSRKNDIFGINDGQLAADDLPY 444

  Fly   425 LALSYANGKSFQDYYNTETHERVDPTSLPTIG--DFDQLFPAMVPLESETHGGEDVGVFASGPWA 487
            ..||||||..:...|..| ...|...:|..|.  :.|.:||:.||||||||||:||.||||||:|
  Fly   445 ATLSYANGPGYDSNYLRE-GGAVRRKNLRAINMKNKDFMFPSTVPLESETHGGDDVAVFASGPYA 508

  Fly   488 HLFTGVYEQNTIPHMMAFAACVGD 511
            .|||||:||:.|||.:.:|:|:.|
  Fly   509 QLFTGVFEQHFIPHALGYASCLSD 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp9NP_001286944.1 PRK10518 12..496 CDD:236706 243/517 (47%)
ALP_like 75..508 CDD:304875 230/444 (52%)
phuNP_649897.4 PhoA 71..524 CDD:224699 233/460 (51%)
alkPPc 93..530 CDD:214515 229/444 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466631
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2001
Isobase 1 0.950 - 0 Normalized mean entropy S3647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm6481
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
1211.750

Return to query results.
Submit another query.