DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and CYP78A5

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_172827.1 Gene:CYP78A5 / 837932 AraportID:AT1G13710 Length:517 Species:Arabidopsis thaliana


Alignment Length:518 Identity:116/518 - (22%)
Similarity:216/518 - (41%) Gaps:108/518 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAGFTALAQQY--GDIYSLTFGHTRCLVVNNLELIREVLNQNG 118
            |||.     |:|.:..  ..:|.....|||:::  ..:.:.:.|.:|.::.:..|..:|:|:.: 
plant    55 PGPS-----GSLSVFS--GSNPHRVLAALAKRFKASPLMAFSVGFSRFVISSEPETAKEILSSS- 111

  Fly   119 KVMSGRPDFIR---YHKLFGGERSNSLALCDWSQLQQKRRNLARRHC-SPREFSCFY-------M 172
             ..:.||  ::   |..||    ..::....:.:..:..|.::..|. |||..:.|.       |
plant   112 -AFADRP--VKESAYELLF----HRAMGFAPYGEYWRNLRRISSTHLFSPRRIASFEGVRVGIGM 169

  Fly   173 KM--------SQIGCEEMEHWNRELGNQLVPGEPINIKPLILKACANMFSQYMCSLRFDYDDVD- 228
            ||        :...|.|:|                 :|.::.....|.....:....:|:|:|: 
plant   170 KMVKKIKSLVTSDACGEVE-----------------VKKIVHFGSLNNVMTTVFGESYDFDEVNG 217

  Fly   229 ----FQQIVQYFDEIFWEINQGHPLDFLPWL-YPFYQRHLNKIINWSSTIRGFIMERIIRHR-EL 287
                .:::|....|:....|......||.|. :...::....:::..:|..|.|:|   :|: :.
plant   218 KGCFLERLVSEGYELLGIFNWSDHFWFLRWFDFQGVRKRCRALVSEVNTFVGGIIE---KHKMKK 279

  Fly   288 SVDLDEPDRDFTDALLKSLLEDKDVSRNTIIFMLEDFI-GGHSAVGNLVMLVLAYIAKNVDIGRR 351
            ..:|:..:.||.|.|| .|.:|:.:|.:.:|.:|.:.| .|...|..||..|||.:..:.||..:
plant   280 GNNLNGEENDFVDVLL-GLQKDEKLSDSDMIAVLWEMIFRGTDTVAILVEWVLARMVLHQDIQDK 343

  Fly   352 IQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLR-YSSSPIV--PHVATEDTVISGYGVTKGT 413
            :..||.:......||::..|:..:||..|.:.|.|| :...|::  ..:|..|..:....|..||
plant   344 LYREIASATSNNIRSLSDSDIPKLPYLQAIVKETLRLHPPGPLLSWARLAIHDVHVGPNLVPAGT 408

  Fly   414 IVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPF 478
            |..:|.:.:..:.|.|.:|:.|.|.||:  |::.|   ..|||         |:|       .||
plant   409 IAMVNMWSITHNAKIWTDPEAFMPERFI--SEDVS---IMGSD---------LRL-------APF 452

  Fly   479 SIGKRTC-------------IGQNLVRGFGFL-----VVVNVMQRYNISSHNPSTIKISPESL 523
            ..|:|.|             ||| |::.|.::     |.:..:.:.::...||...|..|.::
plant   453 GSGRRVCPGKAMGLATVHLWIGQ-LIQNFEWVKGSCDVELAEVLKLSMEMKNPLKCKAVPRNV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 106/478 (22%)
CYP78A5NP_172827.1 CYP78 81..505 CDD:410699 104/474 (22%)

Return to query results.
Submit another query.