DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and cyp2x9

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001070921.1 Gene:cyp2x9 / 768288 ZFINID:ZDB-GENE-061027-109 Length:491 Species:Danio rerio


Alignment Length:548 Identity:147/548 - (26%)
Similarity:241/548 - (43%) Gaps:94/548 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDRYRDSP 77
            :|..|...:|||:  :....:|..:.||.             .|||||.|:.||  ||:...::|
Zfish     1 MLGFLILVWICIV--LLFLFIQIPRPKNF-------------PPGPRPLPLFGN--LLELNINNP 48

  Fly    78 FAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGERSNSL 142
            ...|..||.:||:||||.||....:|:|..|.::|.|.......:|||..:..:::..|   ..:
Zfish    49 LKDFERLANRYGNIYSLYFGSKPWVVLNGFEALKEALVTKAVDFAGRPQDLMVNRVTKG---GGV 110

  Fly   143 ALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLVPGEPINIKPLILK 207
            .|.|:....::.|..|.  .:.|.|......|.:....|:.|...:|..::  |...:.:.:...
Zfish   111 ILSDYGPSWKEHRRFAL--MTLRNFGLGKQSMEERILGEVSHIIDKLEKRV--GTAFDPQTMFHN 171

  Fly   208 ACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWE---INQGHPLDFLPW-----LYPFYQRHL- 263
            |.:|:....:...|:||||    :.::.|..::.|   |..|      ||     .:|.: |:| 
Zfish   172 AASNIICIVLFGSRYDYDD----EFLKLFIHLYTENAKIANG------PWAMIYDTFPMF-RYLP 225

  Fly   264 ---NKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDK---DVS----RNTII 318
               .|....:|..|....:.:..|::..|. .|| |||.|..|..|  ||   |.|    ...|:
Zfish   226 LPFRKAFANASKARELSTQLVKEHKKTWVP-GEP-RDFIDCYLDEL--DKRGNDGSSFSEAQLIL 286

  Fly   319 FMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIF 383
            ::|:....|.....|.::....|:..:.::..:.|:|||.::|::::: :..|.::||||.|...
Zfish   287 YVLDLHFAGTDTTSNTLLTGFLYLMTHPEVQAKCQQEIDDVLEDKDQA-SYEDRHSMPYTQAVTH 350

  Fly   384 EVLRYSSS-PI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKE 446
            ||.|.::: |: |.|..|:||.:.||.:.|||.|..|.......|..|..|.||||..||     
Zfish   351 EVQRVANTVPLSVFHCTTKDTELMGYNIPKGTFVIPNLGSALKEEGQWKFPHEFNPANFL----- 410

  Fly   447 QSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISSH 511
                |.:|.....|:             |:|||.|.|.|:|:.|.|...|||:|.:::|:..   
Zfish   411 ----NEQGEFEKPEA-------------FVPFSAGPRVCLGEGLARMELFLVMVTLLRRFQF--- 455

  Fly   512 NPSTIKISPESLALP--ADCFPLVLTPR 537
                  :.|.....|  ...:.:.|||:
Zfish   456 ------VWPNDAGKPDYTPVYGVTLTPQ 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 139/505 (28%)
cyp2x9NP_001070921.1 p450 28..479 CDD:278495 139/506 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.