DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2c55

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_082365.1 Gene:Cyp2c55 / 72082 MGIID:1919332 Length:490 Species:Mus musculus


Alignment Length:491 Identity:137/491 - (27%)
Similarity:226/491 - (46%) Gaps:97/491 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKV 120
            |||.|:|||||:..:|....|  ..|...::.||.:::|.||....:||:..|.::|.|:..|:.
Mouse    31 PGPTPFPIIGNILQIDIKNIS--KSFNYFSKVYGPVFTLYFGSKPTVVVHGYEAVKEALDDLGEE 93

  Fly   121 MSGRPDFIRYHKLFGGERSNSLAL-----CDWSQLQQ------KRRNLARRHCSPR---EFSCFY 171
            .|||..|..:.::     :|.|.:     ..|.:|::      :...:.:|....|   |.||. 
Mouse    94 FSGRGSFQIFERI-----NNDLGVIFSNGTKWKELRRFSIMTLRSFGMGKRSIEDRIQEEASCL- 152

  Fly   172 MKMSQIGCEEMEHWNRELGNQLVPGEPINIKPLILKACANMFSQYMCSL----RFDYDDVDFQQI 232
                   .||:...|..|           ..|..:.:||.  |..:||:    ||||.|..|..:
Mouse   153 -------VEELRKANGSL-----------CDPTFILSCAP--SNVICSVIFHNRFDYKDEKFLNL 197

  Fly   233 VQYFDEIFWEINQGHPLDFLPWL-----YPFYQRHL----NKIINWSSTIRGFIMERIIRHRELS 288
            ::..:|.|..:|.       ||:     .|....:|    ||:|...:.|:.:|:.|:..|:| :
Mouse   198 MERLNENFKILNS-------PWMQVYNALPTLINYLPGSHNKVIKNFTEIKSYILGRVKEHQE-T 254

  Fly   289 VDLDEPDRDFTDALLKSLLEDK-----DVSRNTIIFMLED-FIGGHSAVGNLVMLVLAYIAKNVD 347
            :|:|.| |||.|..|..:.::|     :.:..:::..:.| |:.|.......:...|..:.|:.:
Mouse   255 LDMDNP-RDFIDCFLIKMEQEKHNPHSEFTIESLMATVTDIFVAGTETTNITLRYGLLLLLKHTE 318

  Fly   348 IGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRYSS--SPIVPHVATEDTVISGYGVT 410
            :..::|.|||.:| ..:||..:.|...||||.|.:.|:.||..  ...|||.||.:.....|.:.
Mouse   319 VTAKVQAEIDHVI-GRHRSPCMQDRTRMPYTDAMVHEIQRYIDLIPNNVPHAATCNVRFRSYFIP 382

  Fly   411 KGT-IVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPH 474
            ||| :|.....||:..::| .||:.|:|..||:.:     .|.|.||                 :
Mouse   383 KGTELVTSLTSVLHDDKEF-PNPEVFDPGHFLDEN-----GNFKKSD-----------------Y 424

  Fly   475 FLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISS 510
            |:|||||||.|:|:.|.|...||::..::|.:|:.|
Mouse   425 FMPFSIGKRMCVGEALARTELFLILTTILQNFNLKS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 137/491 (28%)
Cyp2c55NP_082365.1 p450 30..485 CDD:278495 137/491 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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