DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2ab1

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_017453675.1 Gene:Cyp2ab1 / 679979 RGDID:1586963 Length:494 Species:Rattus norvegicus


Alignment Length:493 Identity:125/493 - (25%)
Similarity:205/493 - (41%) Gaps:91/493 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGER---SNSLALC 145
            |||.:|:::::..|.|..:|:|....::|.|..|.:..||||....:..|||.:.   ||.|.  
  Rat    54 LAQTHGNVFTVWLGSTPIVVLNGFRAVKEALVSNSEQFSGRPLTPFFRDLFGEKGVICSNGLT-- 116

  Fly   146 DWSQLQQKRRNLARRHC--SPREF----SCFYMKMSQIGCEEMEHWNRELGNQLVPGEPINIKPL 204
             |.|        .||.|  :.||.    ....:::.....|..|.:::|.|....|..|      
  Rat   117 -WRQ--------QRRFCLTTLRELGLGKQALELQLQHEAAELAEVFHQEQGRAFDPQVP------ 166

  Fly   205 ILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFLPW-----LYPFYQRHLN 264
            |:::...:....:....|..::..|.::::       .||.|.......|     ::|:..|:|:
  Rat   167 IIRSTTRVIGALVFGHHFLSEEPIFLELIR-------AINLGLAFASTTWRRLYDMFPWALRYLS 224

  Fly   265 ----KIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLE--DKDVS----RNTIIF 319
                ||..:...:||||...||||:   :...|..:||....|..:.:  |..||    .|.|..
  Rat   225 GPHQKIFQYHEAVRGFIHHEIIRHK---LRTPEAPKDFISCYLSQITKAMDDPVSTFSEENLIQV 286

  Fly   320 MLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFE 384
            :::.|:||.......:...:.|:..:..|..|:|:|:|.::... :::...|...:|||.|.:.|
  Rat   287 VIDLFLGGTDTTATTLHWAIIYLVHHRAIQERVQQELDEVLGTA-QAVCYEDRERLPYTRAVLHE 350

  Fly   385 VLRYSSSPIVPHV--ATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQ 447
            |.|.||...|..|  ....|.:.||.|:||||:..|...:....:.|..|.:|||..||:     
  Rat   351 VQRLSSVVAVGAVRQCVTPTWMHGYYVSKGTIILPNLASVLCDPECWETPHQFNPGHFLD----- 410

  Fly   448 SPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISSHN 512
                    ..|....||.         |||||.|.|.|.|:.|.|...||:...:::.:......
  Rat   411 --------KDGDFVTNEA---------FLPFSAGHRVCPGEQLARMELFLMFATLLRTFRFQLPE 458

  Fly   513 PS-----------TIKISPESL-ALPADCFPLVLTPRE 538
            .|           |::..|:.: |:|.   ...|:|||
  Rat   459 GSQGLRLEYVFGGTLQPQPQKICAVPR---LSSLSPRE 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 125/493 (25%)
Cyp2ab1XP_017453675.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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