DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and cyp2d6

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001015719.1 Gene:cyp2d6 / 548436 XenbaseID:XB-GENE-855872 Length:505 Species:Xenopus tropicalis


Alignment Length:543 Identity:144/543 - (26%)
Similarity:223/543 - (41%) Gaps:130/543 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LIYTILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHL 69
            :|:|:|.:||..:           |||       |..|:.          .|.|..||.:|||..
 Frog    21 IIFTLLLLLLDFM-----------KRR-------KPCTDF----------PPSPPSWPFVGNLLQ 57

  Fly    70 LDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLF 134
            :| :||. ...|..|::||||:.||.......:|:|..|:|:|.|.|..:..:.||.|..|..| 
 Frog    58 MD-FRDL-HNSFKQLSKQYGDVMSLRVFWKPTVVLNGFEVIKEALIQKSEDTADRPPFNLYEIL- 119

  Fly   135 GGERSNSLALC------DWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQL 193
             |...|:.|:.      .|..|              |.|:...::...:|.:.:|...|:....|
 Frog   120 -GFVGNNKAVVLANYGQSWKDL--------------RRFTLSTLRDFGMGKKSLEERVRDEAGYL 169

  Fly   194 V------PGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHP--LD 250
            .      .|.|.:...||..|.:|:....:...||:|||..|.:::...:|.....:...|  :.
 Frog   170 CDAFQSEQGGPFDPHVLINTAVSNVICSIIFGERFEYDDHKFLKLLCLIEESIKAESGPVPQIIS 234

  Fly   251 FLPWLYP-------FYQ------RHLNKIIN-----WSSTIRGFIMERIIRHRELSVDLDEPDRD 297
            .|||...       |:|      ::|.:|||     |.|           .|          .||
 Frog   235 SLPWSSKVPGLARLFFQPRIHMLQYLQEIINEHKQTWDS-----------GH----------TRD 278

  Fly   298 FTDALLKSLLEDKDV------SRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEI 356
            |.||.:..:.:.|.|      .:|.::...:.|..|.......:...|.::....|:.|::||||
 Frog   279 FIDAFMLEMKKAKGVKDSNFNDQNLLLTTADLFSAGSETTTTTLRWGLLFMLLYPDVQRKVQEEI 343

  Fly   357 DAIIEEENRSINLLDMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINN 419
            |.:| ...|...:.|:..||||.|.|.|:.||:. .|: |||:|..||.|.|:.:.|||::..|.
 Frog   344 DQVI-GRTRKPTMGDVLQMPYTNAVIHEIQRYADIIPLSVPHMAYRDTHIKGFFIPKGTVIMTNL 407

  Fly   420 YVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRT 484
            ..:...||.|..|.:|.|..||                    |.:...:||..  |:.||.|:|.
 Frog   408 SSVLKDEKVWEKPFQFYPEHFL--------------------DRDGKFVKREA--FMAFSAGRRV 450

  Fly   485 CIGQNLVRGFGFLVVVNVMQRYN 507
            |:|:.|.|...||...:::||::
 Frog   451 CLGEQLARMELFLFFTSLLQRFS 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 134/492 (27%)
cyp2d6NP_001015719.1 p450 52..501 CDD:306555 130/484 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.