DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and cyp2a6.7

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_002939424.3 Gene:cyp2a6.7 / 548374 XenbaseID:XB-GENE-5764740 Length:494 Species:Xenopus tropicalis


Alignment Length:540 Identity:147/540 - (27%)
Similarity:243/540 - (45%) Gaps:106/540 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDR 72
            |.|..|:.:|..|.| :||          .|.||      .|:|....|||.|.|:|||  ||..
 Frog     4 TGLGTLVLILLISCI-VIY----------STWNS------MYRKRNLPPGPTPLPLIGN--LLQI 49

  Fly    73 YRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFG-- 135
            .|.......|...:|||.:|:|..|....:|:|..:.::|.|...|:..|||...:....:||  
 Frog    50 KRGEMVKSLTEFGKQYGPVYTLYLGPRPVIVLNGYQAVKEALIDQGEEFSGRGKLVVADLIFGGF 114

  Fly   136 ------GERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQL- 193
                  |:|        |.||              |.||...::...:|...:|...:|....| 
 Frog   115 GVVFSNGDR--------WKQL--------------RRFSLMTLRDFGMGKRSIEERIKEEAQCLQ 157

  Fly   194 --------VPGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQ--GHP 248
                    .|.:|.||   :::|.:|:....:...||:|::.:|.::::.|:|.|..::.  |..
 Frog   158 VELHKYKQTPTDPQNI---LVQAVSNVICSVVFGNRFEYENSEFLKLLRLFNETFQMMSSTWGQL 219

  Fly   249 LDFLPWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDA-LLKSLLEDKDV 312
            ...:|::..:......||....:....|:.||:.:::| ::|.:.| |||.|. |:|...|.::.
 Frog   220 QQIIPFIMNYIPGPHQKIDKVVARQLEFVSERVKKNQE-TIDFNSP-RDFIDCFLIKMQQETQNP 282

  Fly   313 S-----RNTIIFMLEDFIGG----HSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSIN 368
            :     :|.::.:|..|:.|    .|.:.|.::|:|.|    ..|..::.:|||.:| .:|||.|
 Frog   283 TSEFNLKNLLMTVLNLFVAGTETVSSTLRNGILLLLKY----PHIQEKLHKEIDVVI-GQNRSPN 342

  Fly   369 LLDMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVF-INNYVLNTSEKFWV 430
            :.|.:.|||..|.|.|:.|::. .|: :||...:||...||.:.|.|.|: :...||....:| .
 Frog   343 IDDRSKMPYMDAVIHEIQRFTDILPMNLPHSVIKDTAFQGYTIPKDTDVYPMLCSVLRDPTQF-T 406

  Fly   431 NPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFG 495
            .|:.|||..||:             |||....::.         |:|||.|||.|:|:.|.|...
 Frog   407 TPENFNPEHFLD-------------DSGCFKKSDA---------FMPFSTGKRICLGEGLARMEL 449

  Fly   496 FLVVVNVMQRYNISSHNPST 515
            ||.:..::|.:.::|....|
 Frog   450 FLFLTTILQNFTLTSETQIT 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 134/492 (27%)
cyp2a6.7XP_002939424.3 CYP2 65..489 CDD:410652 121/460 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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