DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and Cyp2w1

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001153737.1 Gene:Cyp2w1 / 545817 MGIID:3616076 Length:493 Species:Mus musculus


Alignment Length:521 Identity:135/521 - (25%)
Similarity:228/521 - (43%) Gaps:103/521 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLL-----DRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLN 115
            |||||.|.:||||||     ||       ....|:::||.::::..|..:.:|::..|::||.|.
Mouse    36 PGPRPLPFLGNLHLLGVTQQDR-------ALMELSERYGPMFTIHLGSQKTVVLSGYEVVREALV 93

  Fly   116 QNGKVMSGRPDFIRYHKLFGGERSNSLALCDWSQLQQKRRNLAR--RHCSPREFSCFYMKMSQIG 178
            ..|..::.||....:..:   :|...:.....::.:..|:...|  :....::.|.....:.::.
Mouse    94 GTGHELADRPPIPIFQHI---QRGGGIFFSSGARWRAGRQFTVRTLQSLGVQQPSMVGKVLQELA 155

  Fly   179 CEEMEHWNRELGNQL--VPGEPINIKPLILKACA--NMFSQYMCSLRFDYDDVDFQQIVQYFDEI 239
            |         |..||  ..|:|:   ||.|...|  |:....:...||||.|..|..::...|::
Mouse   156 C---------LKGQLDSYGGQPL---PLALLGWAPCNITFTLLFGQRFDYQDPVFVSLLSLIDQV 208

  Fly   240 FWEINQGHP----LDFLPWLYPFYQRH---LNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRD 297
            .  :..|.|    .:..|.|..|.:.|   |:||    ..:| .|:..::..|...:....|.:.
Mouse   209 M--VLLGSPGIQLFNTFPRLGAFLRLHRPVLSKI----EEVR-TILRTLLETRRPPLPTGGPAQS 266

  Fly   298 FTDALLKSLLED--KDV--SRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDA 358
            :.:|||:...||  :|:  ..|.:...|:..:.|.......:...:..:.|:..:..|:|||:|.
Mouse   267 YVEALLQQGQEDDPEDMFGEANVLACTLDMVMAGTETTAATLQWAVFLMVKHPHVQGRVQEELDR 331

  Fly   359 II------EEENRSINLLDMNAMPYTMATIFEVLRY-SSSPIVPHVATEDTVISGYGVTKGT--I 414
            ::      :.|::       .|:|||.|.:.||.|| :..|.||.....|..:.||.:.|||  |
Mouse   332 VLGPGQLPQPEHQ-------RALPYTSAVLHEVQRYITLLPHVPRCTAADIQLGGYLLPKGTPVI 389

  Fly   415 VFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFS 479
            ..:.:.:|:.::  |..|.:|||..||:         :||.           .:||..  |||||
Mouse   390 PLLTSVLLDKTQ--WETPSQFNPNHFLD---------AKGR-----------FMKRGA--FLPFS 430

  Fly   480 IGKRTCIGQNLVRGFGFLVVVNVMQRYNISSHNPSTIKISPESLAL-PADCF-------PLVLTP 536
            .|:|.|:|::|.|...||:...::|||.:.. .|.   :||..|.| ||..|       .|.:.|
Mouse   431 AGRRVCVGKSLARTELFLLFAGLLQRYRLLP-PPG---LSPADLDLRPAPAFTMRPPAQTLCVVP 491

  Fly   537 R 537
            |
Mouse   492 R 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 135/521 (26%)
Cyp2w1NP_001153737.1 p450 35..489 CDD:278495 133/516 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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