DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and cyp2c8.2

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001005711.1 Gene:cyp2c8.2 / 448236 XenbaseID:XB-GENE-5852312 Length:495 Species:Xenopus tropicalis


Alignment Length:529 Identity:140/529 - (26%)
Similarity:223/529 - (42%) Gaps:107/529 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TSYICIIYGV---------KRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNL-----HL 69
            |.::|:...:         ||||..|                    |||.|.|::||:     .|
 Frog     5 TIFLCLFIFLLLLFTWKTHKRRVQLP--------------------PGPYPLPLLGNVLQGITVL 49

  Fly    70 LDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLF 134
            .|.||        .|::|||.::::..|.|..:|:...|::::.|..:.:....|..|....:|.
 Frog    50 YDSYR--------KLSEQYGPVFTVWLGSTPMVVLCGYEVLKDALINHSQEFGARGAFPVPERLT 106

  Fly   135 GGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLVP---- 195
            .|....|.....|.||              |.||...::...:|...||....|....|:.    
 Frog   107 DGYGVISTNGTRWQQL--------------RRFSVTVLRNFGMGKRSMEERIHEETQHLIQAVQH 157

  Fly   196 --GEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFL-PWLYP 257
              ||..:...|:.:|..|:.:..:...|:||.|....::....:.|...:..  ||..: ..||.
 Frog   158 TGGEAFDPLYLLGRAVNNIINLIVFGRRWDYKDKMMIKLFNIINSILLFLRS--PLGVIYSALYQ 220

  Fly   258 FYQRHL----NKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDKD------V 312
            ..| ||    .||.:.|.|::.||.|:|..|:| ::|.|.| ||:.|..|....::||      .
 Frog   221 IMQ-HLPGPHQKIFHDSETVKSFIREQINSHKE-TLDSDSP-RDYIDCFLIKANQEKDHHSSEFS 282

  Fly   313 SRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPY 377
            ..|.:..:.:.|:.|.....|.:...|..|.....|..::|:|||.::..: |...:.|...|||
 Frog   283 QENLVNTVFDFFVAGTETATNTIQFSLLVIITYPHIQAQVQKEIDKVVGPD-RLPGIADRAQMPY 346

  Fly   378 TMATIFEVLRY-SSSPI-VPHVATEDTVISGYGVTKGTIV--FINNYVLNTSEKFWVNPKEFNPL 438
            |.|.|.|:.|: ...|: :||:||:|||..|:.:.|||.|  .|.:.:.:.:.  |..|:||||.
 Frog   347 TNAVIHEIHRFLDLVPLSLPHMATQDTVCRGFRIPKGTTVIPLIGSALCDPAH--WETPEEFNPE 409

  Fly   439 RFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVM 503
            .||                   :.|.:..:.   |.|:|||.|||.|:|:.|.|...||....::
 Frog   410 HFL-------------------NQNGEFYIP---PAFMPFSAGKRVCLGEGLARMEIFLFFTALL 452

  Fly   504 QRYNISSHN 512
            |::.|...|
 Frog   453 QKFTIRVAN 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 133/483 (28%)
cyp2c8.2NP_001005711.1 p450 49..464 CDD:365848 126/465 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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