DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2j3

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_786942.1 Gene:Cyp2j3 / 313375 RGDID:631442 Length:502 Species:Rattus norvegicus


Alignment Length:566 Identity:155/566 - (27%)
Similarity:237/566 - (41%) Gaps:114/566 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LAALIYTILAI-LLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIG 65
            |...|:|:|.: :|.:.|.:::.:...:|.|     :.||             ..|||...|::|
  Rat     8 LLGAIWTVLHLRILLLAAVTFLFLADFLKHR-----RPKN-------------YPPGPWRLPLVG 54

  Fly    66 NLHLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRP-DFIR 129
            .|..||  ...|........::||::.||.|.:...:||..:.||:|:..|.......|| ..:|
  Rat    55 CLFHLD--PKQPHLSLQQFVKKYGNVLSLDFANIPSVVVTGMPLIKEIFTQMEHNFLNRPVTLLR 117

  Fly   130 YHKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLV 194
            .| ||   ..|.|........:::||           |:...::...:|.:.:|...:|....||
  Rat   118 KH-LF---NKNGLIFSSGQTWKEQRR-----------FALMTLRNFGLGKKSLEQRIQEEAYHLV 167

  Fly   195 P------GEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDE--------------I 239
            .      |.|.:....|.||.:|:........||:|.|..||::::..||              |
  Rat   168 EAIKDEGGLPFDPHFNINKAVSNIICSVTFGERFEYHDSQFQEMLRLLDEAMCLESSMMCQLYNI 232

  Fly   240 FWEINQGHPLDFLPWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLK 304
            |..|     |.:||      ..|.....||.. ::.||.:.|..||. ..|.||| |||.||.||
  Rat   233 FPRI-----LQYLP------GSHQTLFSNWRK-LKLFISDIIKNHRR-DWDPDEP-RDFIDAFLK 283

  Fly   305 SLLE--DKDVS----RNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEE 363
            .:.:  ||..:    .|.|...|:.|..|.......:...|..:|...::..::|.|||.:| .:
  Rat   284 EMAKYPDKTTTSFNEENLICSTLDLFFAGTETTSTTLRWALLCMALYPEVQEKMQAEIDRVI-GQ 347

  Fly   364 NRSINLLDMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSE 426
            .|..||.|.::||||.|.|.||.|..: .|. ||.....||.::|:.:.|||::..|...|:...
  Rat   348 GRQPNLADRDSMPYTNAVIHEVQRIGNIIPFNVPREVAVDTYLAGFNLPKGTMILTNLTALHRDP 412

  Fly   427 KFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLV 491
            |.|..|..|||..|||..                      |.|:. ..|||||:|||.|:|:.|.
  Rat   413 KEWATPDTFNPEHFLENG----------------------QFKKR-ESFLPFSMGKRACLGEQLA 454

  Fly   492 RGFGFLVVVNVMQRY--------NISSHNPSTIKISPES---LALP 526
            |...|:.:.:::|::        .:|.....::.|||.|   .|:|
  Rat   455 RSELFIFITSLIQKFTFKPPVNEKLSLQFRMSVTISPVSHRLCAIP 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 130/467 (28%)
Cyp2j3NP_786942.1 CYP2J 75..496 CDD:410755 134/473 (28%)

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