DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and Cyp2s1

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001100965.1 Gene:Cyp2s1 / 308445 RGDID:1306078 Length:499 Species:Rattus norvegicus


Alignment Length:520 Identity:137/520 - (26%)
Similarity:227/520 - (43%) Gaps:98/520 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAGFTALAQQYGDIYSLTFG-HTRCLVVNNLELIREVLNQNGK 119
            |||.|.|::||  ||.....:.::||..|:::||.::::..| ..|.:|:...:.|||.|....:
  Rat    33 PGPTPLPLLGN--LLQLRPGALYSGFLRLSKKYGPVFTVHLGPWRRVVVLVGHDAIREALGGQAE 95

  Fly   120 VMSGRPDFIRYHKLF--------GGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQ 176
            ..|||.......|.|        .|||        |.||              |:|:...::...
  Rat    96 EFSGRGTLATLDKTFDGHGVFFANGER--------WKQL--------------RKFTLLALRDLG 138

  Fly   177 IGCEEMEHWNRELGNQLV------PGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQY 235
            :|..|.|...:|....||      .|.|.|...|:.:|.:|:....:..:|..|:|.:||.::|.
  Rat   139 MGKREGEELIQEEVQNLVKAFQRTEGRPFNPSMLLAQATSNVVCSLIFGIRLPYEDKEFQAVIQA 203

  Fly   236 FDEIFWEINQ--GHPLDFLPWL-------YPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDL 291
            .......|:.  |...:...||       :...|.||       .|:..|.::::.||:..| ..
  Rat   204 ASGTLLGISSPWGQAYEMFSWLLQPLPGPHTQLQHHL-------GTLAAFTIQQVQRHQGRS-HT 260

  Fly   292 DEPDRDFTDALLKSLLEDKD------VSRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGR 350
            ..|.||..||.|:.:.::|:      ..:|.::.:......|...:|..:...|..:.|...:.:
  Rat   261 SGPARDVVDAFLQKMAQEKEDPGTEFTEKNLLMTVTYLLFAGTMTIGATIRYALLLLLKYPQVQK 325

  Fly   351 RIQEEIDAIIEE--ENRSINLLDMNAMPYTMATIFEVLR-YSSSPI-VPHVATEDTVISGYGVTK 411
            |::||   :|:|  .:|:.:|.|...:|||.|.:.|..| .:..|: :||..|:.|...||.:.|
  Rat   326 RVREE---LIQELGPSRTPSLSDRVRLPYTDAVLHEAQRLLALVPMGMPHTVTKTTSFRGYTLPK 387

  Fly   412 GTIVF-INNYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHF 475
            ||.|| :...||:....| .||:||:|.|||:             |.|....:|.         |
  Rat   388 GTEVFPLIGSVLHDPAVF-RNPEEFHPSRFLD-------------DDGRIRKHEA---------F 429

  Fly   476 LPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISSH-NPSTIKISPESLAL---PADCFPLVLTP 536
            ||:|:|||.|:|:.|.|...:|...:::|.:::.:. .|..:.:.|....|   |.| |.|.:.|
  Rat   430 LPYSLGKRVCLGEGLARAELWLFFTSILQAFSLDTPCPPGDLSLKPAVRGLFNIPPD-FQLQVWP 493

  Fly   537  536
              Rat   494  493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 137/520 (26%)
Cyp2s1NP_001100965.1 p450 48..491 CDD:365848 127/499 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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