DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2d5

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_775426.1 Gene:Cyp2d5 / 286963 RGDID:628630 Length:504 Species:Rattus norvegicus


Alignment Length:566 Identity:139/566 - (24%)
Similarity:246/566 - (43%) Gaps:109/566 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IYTILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQ--APGPRPWPIIGNLH 68
            |:|::.|||                           .::.|. :|::|.  .|||.|||::|||.
  Rat    14 IFTVIFILL---------------------------VDLMHR-HQRWTSRYPPGPVPWPVLGNLL 50

  Fly    69 LLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKL 133
            .:|. .:.|::.: .|..:|||::||..|....::||.|:.::|||..:|:..:.||....:..|
  Rat    51 QVDP-SNMPYSMY-KLQHRYGDVFSLQMGWKPMVIVNRLKAVQEVLVTHGEDTADRPPVPIFKCL 113

  Fly   134 FGGERSNSLALCDWS-QLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHW-NRELGN----- 191
            ....||..:....:. :.:::||           ||...::...:|.:.:|.| .:|.|:     
  Rat   114 GVKPRSQGVVFASYGPEWREQRR-----------FSVSTLRTFGMGKKSLEEWVTKEAGHLCDAF 167

  Fly   192 QLVPGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFLPWLY 256
            ....|..||.|.::.||..|:.:..:.:.||:|:|....:::...:|...|::     .|:|.:.
  Rat   168 TAQNGRSINPKAMLNKALCNVIASLIFARRFEYEDPYLIRMLTLVEESLIEVS-----GFIPEVL 227

  Fly   257 PFYQRHL------NKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALL------KSLLED 309
            ..:...|      :|:.....|...| ::.::.....:.|..:|.|:.|||.|      |...|.
  Rat   228 NTFPALLRIPGLADKVFQGQKTFMAF-LDNLLAENRTTWDPAQPPRNLTDAFLAEVEKAKGNPES 291

  Fly   310 KDVSRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNA 374
            .....|..:.:::.|..|.......:...|..:....|:.||:|:|||.:|.:. |...:.|...
  Rat   292 SFNDENLRMVVVDLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQV-RCPEMTDQAH 355

  Fly   375 MPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNP 437
            ||||.|.|.||.|:.. :|: :|.:.:.|..:..:.:.|||.:.||...:...|..|..|..|:|
  Rat   356 MPYTNAVIHEVQRFGDIAPLNLPRITSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPLRFHP 420

  Fly   438 LRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNV 502
            ..||:         ::|:....|:             |:|||.|:|.|:|:.|.|...||....:
  Rat   421 EHFLD---------AQGNFVKHEA-------------FMPFSAGRRACLGEPLARMELFLFFTCL 463

  Fly   503 MQRYNIS----SHNPST-----IKISPESLALPADCFPLVLTPREK 539
            :|.::.|    ...|||     |.::|    ||   :.|....||:
  Rat   464 LQHFSFSVPAGQPRPSTLGNFAISVAP----LP---YQLCAAVREQ 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 112/460 (24%)
Cyp2d5NP_775426.1 CYP2D 68..495 CDD:410756 116/473 (25%)

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