DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and Cyp3a18

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:563 Identity:135/563 - (23%)
Similarity:231/563 - (41%) Gaps:119/563 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VLATSYICI-IYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDRYRDSPFA 79
            :||||.:.. |||.               .:|..::| ...|||:|.|:.|.:.   .|.|..:.
  Rat    14 LLATSLMLFYIYGT---------------YSHGLFKK-LGIPGPKPVPLFGTIF---NYGDGMWK 59

  Fly    80 GFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVL-NQNGKVMSGRPDFIRYHKLFG--GERSNS 141
            ......::||.|:....|....|.:.:.|:|:.|| .:...|.:.|       :.||  |....:
  Rat    60 FDDDCYKKYGKIWGFYEGPQPFLAIMDPEIIKMVLVKECYSVFTNR-------RCFGPMGFMKKA 117

  Fly   142 LALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLVPGEPINIKPLIL 206
            :.:.:..:.::.|..|:....|.:....|.: |.|.|...:::..||...    |||||:|    
  Rat   118 ITMSEDEEWKRLRTILSPTFTSGKLKEMFPL-MRQYGDTLLKNLRREEAK----GEPINMK---- 173

  Fly   207 KACANMFSQYM------CSLRFDYDDVDFQQ-----------IVQYFDEIFWEINQGHPLDFLPW 254
                ::|..|.      .|...:.|.::..|           ..|.||.....:      ...|:
  Rat   174 ----DIFGAYSMDVITGTSFGVNVDSLNNPQDPFVQKAKKILKFQIFDPFLLSV------VLFPF 228

  Fly   255 LYPFYQRHLNKIINWSSTIR---GFIMERIIRHRELSVDLDEPDR-DFTDALL----------KS 305
            |.|.|:     ::|:|...|   .|..:.:...::..:|.::..| ||...::          :.
  Rat   229 LTPIYE-----MLNFSIFPRQSMNFFKKFVKTMKKNRLDSNQKSRVDFLQLMMNTQNSKGQESQK 288

  Fly   306 LLEDKDVSRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLL 370
            .|.|.:::...|||:    .||:.|....:..::..:|...::.:::|.|||..:  .|::....
  Rat   289 ALSDLEMAAQAIIFI----FGGYDATSTSISFIMYELATRPNVQKKLQNEIDRAL--PNKAPVTY 347

  Fly   371 D-MNAMPYTMATIFEVLR-YSSSPIVPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPK 433
            | :..|.|....:.|.|| |..:..:..|:.:|..|:|..:.|||:|.|..|.|:.:.::|:.|:
  Rat   348 DALMEMEYLDMVVNESLRLYPIATRLDRVSKKDVEINGVFIPKGTVVTIPIYPLHRNPEYWLEPE 412

  Fly   434 EFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPH-FLPFSIGKRTCIGQNLVRGFGFL 497
            ||||.||   |||     :|||..               |: :|||..|.|.|||.........|
  Rat   413 EFNPERF---SKE-----NKGSID---------------PYVYLPFGNGPRNCIGMRFALISMKL 454

  Fly   498 VVVNVMQRYNISSHNPSTI--KISPESLALPADCFPLVLTPRE 538
            .|:.|:|.:||.....:.|  |||.:.:..|.....|.|..|:
  Rat   455 AVIGVLQNFNIQPCEKTQIPLKISRQPIFQPEGPIILKLVSRD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 126/522 (24%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 115/484 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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