DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2a1

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_036824.1 Gene:Cyp2a1 / 24894 RGDID:2463 Length:492 Species:Rattus norvegicus


Alignment Length:521 Identity:133/521 - (25%)
Similarity:231/521 - (44%) Gaps:92/521 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGN---LHLL 70
            :|.::|:.|:...:..::..|.|...|                    |||.|.|.|||   |:..
  Rat     7 LLVVILASLSVMLLVSLWQQKIRGRLP--------------------PGPTPLPFIGNYLQLNTK 51

  Fly    71 DRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFG 135
            |.|     :..|.|:::||.::::..|..|.:|:...:.::|.|....:..|||.:...|:.||.
  Rat    52 DVY-----SSITQLSERYGPVFTIHLGPRRVVVLYGYDAVKEALVDQAEEFSGRGEQATYNTLFK 111

  Fly   136 GERSNSLALCDWSQLQQKRR---------NLARRHCSPR--EFSCFYMKMSQIGCEEMEHWNREL 189
            |   ..:|.....:.:|.||         .:.:|....|  |.:.:.:||.|..|          
  Rat   112 G---YGVAFSSGERAKQLRRLSIATLRDFGVGKRGVEERILEEAGYLIKMLQGTC---------- 163

  Fly   190 GNQLVPGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEI--FWEINQGHPLDFL 252
                  |.||:....:.|..:|:.|..:...||||:|.:|..::|...::  |.....|...|..
  Rat   164 ------GAPIDPTIYLSKTVSNVISSIVFGERFDYEDTEFLSLLQMMGQMNRFAASPTGQLYDMF 222

  Fly   253 PWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDKDVS---- 313
            ..:..:......:||..:..:..|::|: :|....::|.:.| |:|.|:.|..:.|:|:.:    
  Rat   223 HSVMKYLPGPQQQIIKVTQKLEDFMIEK-VRQNHSTLDPNSP-RNFIDSFLIRMQEEKNGNSEFH 285

  Fly   314 -RNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPY 377
             :|.::..|..|..|...|.:.:......:.|:.|:..::.|||:.:| ..||.....|...|||
  Rat   286 MKNLVMTTLSLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIEQVI-GRNRQPQYEDHMKMPY 349

  Fly   378 TMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRF 440
            |.|.|.|:.|:|: :|: :|....::|...|:.:.|.|.||.....|.|..||:.:||:|:|..|
  Rat   350 TQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKATDVFPILGSLMTDPKFFPSPKDFDPQNF 414

  Fly   441 LEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQR 505
            |:                     :|.|||:|.. |||||.|||.|:|..|.:...||::..::|.
  Rat   415 LD---------------------DKGQLKKNAA-FLPFSTGKRFCLGDGLAKMELFLLLTTILQN 457

  Fly   506 Y 506
            :
  Rat   458 F 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 127/474 (27%)
Cyp2a1NP_036824.1 p450 33..489 CDD:278495 128/495 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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