DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2ab1

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:XP_017172441.1 Gene:Cyp2ab1 / 224044 MGIID:3644957 Length:459 Species:Mus musculus


Alignment Length:494 Identity:128/494 - (25%)
Similarity:206/494 - (41%) Gaps:93/494 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGER---SNSLALC 145
            |||.:|.::::..|.|..:|::....::|.|..|.:..||||....:..|||.:.   ||.|.  
Mouse    19 LAQTHGSVFTVWLGSTPIVVLSGFRAVKEALVSNSEQFSGRPLTPFFRDLFGEKGVICSNGLT-- 81

  Fly   146 DWSQLQQKRRNLARRHC--SPREFSCFYMKMSQIGCE-EMEHWNRELGNQLVPGEPINIKPL--I 205
             |.|        .||.|  :.||     :.:.:...| :::|...||....:..|.....|.  |
Mouse    82 -WRQ--------QRRFCLTTLRE-----LGLGKQALEVQLQHEAAELAKVFLQEEGRAFDPQIPI 132

  Fly   206 LKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFLPW-----LYPFYQRHLN- 264
            :::...:....:....|..::..|.:::|       .||.|.......|     ::|:..|||: 
Mouse   133 IRSTTRVIGTLVFGHHFLSEEPIFLELIQ-------AINLGLAFASTIWRRLYDMFPWALRHLSG 190

  Fly   265 ---KIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLE--DKDVS----RNTIIFM 320
               ||..:...:||||...||||:   :...|..:||.:..|..:.:  |..||    .|.|..:
Mouse   191 PHQKIFQYHEAVRGFIRHEIIRHK---LRTAEAPKDFINCYLSQITKAIDDPVSTFSEENLIQVV 252

  Fly   321 LEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEV 385
            ::.|:||.......:...|.|:..:..|..|:|:|:|.::... ::|...|...:|||.|.:.||
Mouse   253 IDLFLGGTDTTATTLHWALIYLVHHRAIQERVQQELDEMLGAA-QTICYEDRERLPYTRAVLHEV 316

  Fly   386 LRYSSSPIVPHV--ATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQS 448
            .|.||...|..|  ....|.:.||.|.||||:..|...:....:.|.:|.:|||..||:      
Mouse   317 QRLSSVVAVGAVRQCVTSTWMHGYYVPKGTIILPNLASVLYDPECWESPHQFNPGHFLD------ 375

  Fly   449 PKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISSHNP 513
                  .|....: ||.         |||||.|.|.|.|:.|.|...||:...:::.:.......
Mouse   376 ------KDGNFVA-NEA---------FLPFSAGHRVCPGEQLARMELFLMFATLLRTFQFQLPEG 424

  Fly   514 S-----------TIKISPESLALPADCFPL---VLTPRE 538
            |           |::..|:.:     |..|   .|:|||
Mouse   425 SQDLGLEYVFGGTLQPQPQKI-----CAVLRQSSLSPRE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 128/494 (26%)
Cyp2ab1XP_017172441.1 p450 18..446 CDD:365848 122/480 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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