DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and cyp-35B3

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_504095.1 Gene:cyp-35B3 / 187092 WormBaseID:WBGene00019470 Length:499 Species:Caenorhabditis elegans


Alignment Length:541 Identity:122/541 - (22%)
Similarity:210/541 - (38%) Gaps:146/541 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLLDRY---RDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQN 117
            |||..:|||||:..:..|   .:..........:.||:::::..|....:.:.:.|..:||..:|
 Worm    27 PGPIAFPIIGNIPQVAYYVWKTEGMVPALDLFRKTYGNVFTIWLGPIPHVSICDYETSQEVFVKN 91

  Fly   118 GKVMSGR---PDFIRYHKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGC 179
            |.....|   |.||...:..|...:|.   ..|:::              |.|:....:...:|.
 Worm    92 GNKFKDRLLPPIFIHVSENLGLLTANG---DSWAEM--------------RGFTLLAFRNMGVGK 139

  Fly   180 EEMEHWNRELGNQLVPGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEIN 244
            :.||  .|.|       :.:|.:      ||.:          |.|.|:.:.||:..|  |:::.
 Worm   140 DLME--KRIL-------DELNAR------CAEI----------DADAVNGKTIVKISD--FFDLT 177

  Fly   245 QGHPL---------------DFLPWLYPFYQRHLNKIINWSSTI-------------RGF----- 276
            .|..:               :||         ||.|||:.||.|             :.|     
 Worm   178 VGSVINSTLVGKRFEAHNKDEFL---------HLKKIIHVSSDIFTTFDMTVPVWVLKTFFPGRF 233

  Fly   277 -----IMERIIRH--RELSVDLD-----------EPDRDFTDALLKSLLEDKDVSRNTIIFM--- 320
                 |.|.::::  ||.|...|           |..:||.:|.|..:.:::.....|...|   
 Worm   234 ARSVEIQEEVLKYVSREASKRYDKMKLGEYTPSSEDPQDFVEAFLAKIDQEEQTGGPTHFTMRCL 298

  Fly   321 ---LED-FIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMAT 381
               :.| ::.|.......::.....:..|.::.|:.:|||..|.|...|.:.|.|.....|..||
 Worm   299 NQVIADLWLAGQDTTATTLVSGFNQLVNNPEVMRKCREEIMKITENGYRPLQLKDRAETHYLNAT 363

  Fly   382 IFEVLRYSSSPIVP--HVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPS 444
            |.|:.|::|...|.  .:..|.|:::||.:..|.::......|:.:...:.:|.:|.|.||:|  
 Worm   364 IAEIQRHASILNVNFWRLVHEPTIVNGYEIDAGAVITSQLGALHVNNDIFKDPSKFYPERFIE-- 426

  Fly   445 KEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNIS 509
                              |.||     :...:||.||||:|:|:|:.|...:|::.|::.||:|.
 Worm   427 ------------------NGKL-----LNQIIPFGIGKRSCVGENIARSELYLMIGNLLLRYDIK 468

  Fly   510 SHN--PSTIKISPESLALPAD 528
            .|.  ||.....|.|:....|
 Worm   469 PHGSLPSLDDKLPYSVGKMPD 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 109/495 (22%)
cyp-35B3NP_504095.1 CYP1_2-like 63..492 CDD:410710 112/505 (22%)

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