DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and cyp-35A2

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_504880.2 Gene:cyp-35A2 / 182177 WormBaseID:WBGene00015400 Length:494 Species:Caenorhabditis elegans


Alignment Length:521 Identity:123/521 - (23%)
Similarity:214/521 - (41%) Gaps:107/521 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 YQKYTQ-APGPRPWPIIGNL--------------HLLDRYRDSPFAGFTALAQQYGDIYSLTFGH 98
            |||.:: .|||...|:||||              ..||.:|           ::||:|::|..|.
 Worm    19 YQKVSRLPPGPISLPLIGNLPQIIYYLWSTGGIVSTLDLFR-----------KRYGNIFTLWVGP 72

  Fly    99 TRCLVVNNLELIREVLNQN-GKVMSGRPDFIRYHKLFGGERSNSLALC-----DWSQLQQKRRNL 157
            ...:.:.:.|...||..:| ||...      ::|.....:..|.:.:.     .|.::       
 Worm    73 IPHVSIADYETSHEVFVKNAGKYAD------KFHAPVMRDVRNDIGVLITNGDHWQEM------- 124

  Fly   158 ARRHCSPREFSCFYMKMSQIGCEEME-HWNRELGNQLVPGEPINIKPLILKACANMFSQYMCSL- 220
                   |.||....:...:|.:.|| ....||..:....:.:....:.:...:..|...:.|: 
 Worm   125 -------RRFSLQAFRNMGVGKDIMETRIMEELDARCSDIDKLATNGVTITHASEFFDLTVGSII 182

  Fly   221 -------RFDYDDV-DFQQIVQYFD---EIFWEINQGHPLDFLPWLYPFYQRHLNKIINWSSTIR 274
                   ||:.|.. :|.:|.:..|   |.|...:...|:.||.   .|::...:||.:...|.:
 Worm   183 NSILVGKRFEEDTKHEFLKIKETMDASFETFSPFDMTAPVWFLK---TFFKHRYDKIWSAQETAK 244

  Fly   275 GFIMERIIRHRELSVD-----LDEPD-RDFTDALLKSLL---EDKDVSRNTIIFMLED-FIGGHS 329
            .|.....|:..| |:.     :||.: :|:|||.|..:.   |.||.:..|:..|:.| ::.|..
 Worm   245 NFAAAEAIKRVE-SIKSGKYVIDENNLQDYTDAFLLKIQKEGESKDFNIETLKTMIIDLWMTGQE 308

  Fly   330 AVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRYSSSPIV 394
            .....::.....:..:.::..:.:|||..|.|..:|.::|.|..:.||..|.|.|:.|::|...|
 Worm   309 TTTTTLISGFNQLLLHPEVMIKAREEILKITENGSRHLSLTDRTSTPYVNAVIGEIQRHASILNV 373

  Fly   395 P--HVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDS 457
            .  .:..|.|.:.|:.|..|.:|......|:.:|..:.||:||||.||:.               
 Worm   374 SFWKINKEFTYMGGHPVDAGALVTSQLSALHVNETVFKNPQEFNPERFIR--------------- 423

  Fly   458 GIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISSHNP-STIKISPE 521
                |.:.||      ..:||.:|||.|:|::|.:...:|:..|::.||....|.. ||.::.|.
 Worm   424 ----DGKLLQ------KVIPFGVGKRNCLGESLAKAELYLIFGNLLLRYKFEQHGKLSTTELMPY 478

  Fly   522 S 522
            |
 Worm   479 S 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 106/462 (23%)
cyp-35A2NP_504880.2 CYP1_2-like 63..489 CDD:410710 108/466 (23%)

Return to query results.
Submit another query.