DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and cyp-33C5

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_503616.1 Gene:cyp-33C5 / 178706 WormBaseID:WBGene00018261 Length:494 Species:Caenorhabditis elegans


Alignment Length:554 Identity:138/554 - (24%)
Similarity:247/554 - (44%) Gaps:100/554 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAY-QKYTQAPGPRPWPIIGNLHLLDRYRDS 76
            ::.:|.::.:|:.                  :.|..| ::.:..|||.|.|.:||  .|....:.
 Worm     1 MILLLLSAAVCLF------------------LFHELYWKRRSLPPGPTPLPFMGN--TLAMLLEK 45

  Fly    77 P-FAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGG---- 136
            | :..|....:|:|.:|:...|:...:::.:.:|::|...::|.....:.......||.||    
 Worm    46 PGYECFRRWTKQFGGVYTFWMGNIPYVIIGSYDLLKETFVRDGDTYKDKYPQPFNEKLRGGMYGI 110

  Fly   137 -ERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLVPGEPIN 200
             |.:..:    ||  ..:|..|:    :.|:|......|.:....|:|...|:...||  |:..:
 Worm   111 VESNGHM----WS--THRRFALS----TLRDFGLGKDLMQEKILIEVEDIFRKYDAQL--GKEQD 163

  Fly   201 IKPLILKACANMFSQYMCSLRFDYDDVD----FQQIVQYFDEIFWEINQGHPLDFLPWLYPFYQ- 260
            |:.::..|.||:.:|.:...|||..:.:    .:.:|:|.::.|..: :.:...|:|.:..|.. 
 Worm   164 IQVVLNNAIANVINQTIFGYRFDETNQEEFERMRHLVEYQEKQFATV-KVYVEAFVPTIGKFLPG 227

  Fly   261 RHLNKII-NWSSTIRGFIMERIIRHRELSVDLD-EPDRDFTDALLK-----SLLEDKDVSRNTII 318
            :.|:::: :|.::...|...:|..||: .:|.| |..:|:.:|.||     ..|.:.::..||..
 Worm   228 KSLDQLLDDWRNSFYTFFDTQIENHRK-KIDFDSEESQDYAEAYLKEQKKQEALGEFELFSNTQF 291

  Fly   319 --FMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMAT 381
              ..|:.::.|.|.....|...:.|:..:.|:.:::.||.|.::..: |.:.:.|.|.:||..|.
 Worm   292 SNTCLDLWLAGVSTTNTTVNWTICYVLNHPDVLQKMNEEFDQVVGSD-RLVTMGDKNNLPYFNAV 355

  Fly   382 IFEVLRYSSSPIVP----HVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLE 442
            :.|..|.::  |||    |..|:||||:||.|.|||.|......:...||.:..|.:|||.||::
 Worm   356 LNESQRCAN--IVPINLFHATTKDTVINGYPVKKGTGVIAQISTVMLDEKIFPEPYKFNPDRFID 418

  Fly   443 PSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYN 507
                   :|.|             .:|  |...:|||||||.|.|:.|.|...||.:.|...|| 
 Worm   419 -------ENGK-------------PIK--IEQLIPFSIGKRQCPGEGLARMEIFLFLANFFNRY- 460

  Fly   508 ISSHNPSTIKISPESLALPADCFPLVLTPREKIG 541
                     ||||.|...|.      |..::.:|
 Worm   461 ---------KISPSSKVFPN------LDKKDNVG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 117/453 (26%)
cyp-33C5NP_503616.1 CYP1_2-like 59..484 CDD:410710 123/476 (26%)

Return to query results.
Submit another query.