DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2t1

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_599196.2 Gene:Cyp2t1 / 171380 RGDID:620086 Length:497 Species:Rattus norvegicus


Alignment Length:567 Identity:130/567 - (22%)
Similarity:230/567 - (40%) Gaps:116/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNL------ 67
            :|.::|:::..|:..:.:..:.|:.:.:                  .|||.|.|::|||      
  Rat     9 LLLLILTLMLMSWGWLAHQARARMQKDL------------------PPGPAPLPLLGNLLQLQSG 55

  Fly    68 HLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHK 132
            | |||.       ...|:.::|.::::..|....:|::....:|:.|.......|||.....:.:
  Rat    56 H-LDRV-------LMELSSRWGPVFTVWLGPRPAVVLSGYAALRDALVLQADAFSGRGSMAVFER 112

  Fly   133 LFGGERSNSLALCD---WSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGN--- 191
            ...|   |.:...:   |..|              |.|:...:|...:|...:|  .|.|..   
  Rat   113 FTHG---NGIVFSNGPRWRTL--------------RNFALGALKEFGVGTSTIE--ERILEETAC 158

  Fly   192 -----QLVPGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIF------WEINQ 245
                 |...|.|.:.:.|:..|.:|:....:...|::|.|.:|.:::..|.:.|      |....
  Rat   159 VLDEFQATMGAPFDPRRLLDNAVSNVICTVVFGKRYNYGDPEFLRLLDLFSDNFRIMSSRWGETY 223

  Fly   246 GHPLDFLPWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDK 310
            .....|:.|:...:.|    |......:|.||.|:|..||: |....|| |||.|..|:.:  ||
  Rat   224 NMFPSFMDWIPGPHHR----IFKNFQELRLFISEQIQWHRQ-SRQTGEP-RDFIDCFLEQM--DK 280

  Fly   311 D-------VSRNTIIFMLED-FIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSI 367
            :       ....|::....: |.||.......:...|..:.|..::..::|||:||.: ...|:.
  Rat   281 EHQDPESHFQDETLVMTTHNLFFGGTETTSTTLRYGLLIMLKYPEVAAKVQEELDATV-GRTRAP 344

  Fly   368 NLLDMNAMPYTMATIFEVLRY-SSSPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWV 430
            :|.|...:|||.|.:.|:.|: |..|: :|.....|..:..:.:.|||.|.......:.....:.
  Rat   345 SLADRAHLPYTNAVLHEIQRFISVLPLGLPRALIRDVNLRNHFLHKGTFVIPLLVSAHRDPTQFK 409

  Fly   431 NPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFG 495
            :|..|||..||:             |.|...:|:.         |:||:.|||.|:|..|.|...
  Rat   410 DPDHFNPTNFLD-------------DQGEFQNNDA---------FMPFAPGKRMCLGAGLARSEI 452

  Fly   496 FLVVVNVMQRYN-ISSHNPSTIKISPESLAL----PADCFPLVLTPR 537
            ||.:..::|::: :...:|:.|.::|:...|    ||  |.|.|..|
  Rat   453 FLFLTAILQKFSLLPVGSPADIDLTPQCTGLGNVPPA--FQLRLVAR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 126/520 (24%)
Cyp2t1NP_599196.2 cytochrome_P450 68..492 CDD:425388 110/475 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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