DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2j6

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_034138.3 Gene:Cyp2j6 / 13110 MGIID:1270148 Length:501 Species:Mus musculus


Alignment Length:566 Identity:160/566 - (28%)
Similarity:248/566 - (43%) Gaps:93/566 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLAA---LIYTILAIL----LSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGP 58
            ||||   |:.||.|.|    |.|.|.:::.:....|.|     :.||             ..|||
Mouse     1 MLAATGSLLATIWAALHPRTLLVAAVTFLLLADYFKNR-----RPKN-------------YPPGP 47

  Fly    59 RPWPIIGNLHLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSG 123
            ...|.:||:..||  ...|......|.::||:|:||..|....:|:..|.||:|.|.|..:.:..
Mouse    48 WGLPFVGNIFQLD--FGQPHLSIQPLVKKYGNIFSLNLGDITSVVITGLPLIKEALTQMEQNIMN 110

  Fly   124 RPDFIRYHKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRE 188
            ||..:...::   ...|.|........:::||           |:...::...:|.:.:|...:|
Mouse   111 RPLSVMQERI---SNKNGLIFSSGQIWKEQRR-----------FALMTLRNFGLGKKSLEERMQE 161

  Fly   189 LGNQLV------PGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFW----EI 243
            ..:.||      .|:|.|....|..|.:|:........||||.|..||::::..||:.:    .|
Mouse   162 EASHLVEAIREEEGKPFNPHFSINNAVSNIICSVTFGERFDYHDSRFQEMLRLLDEVMYLETTMI 226

  Fly   244 NQGHPLDFLPWLYPFYQRHLNKII-NWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLL 307
            :|.:  :..||:..:......|:. ||.. ::.|:...|..||: ..:.||| |||.||.||.:.
Mouse   227 SQLY--NIFPWIMKYIPGSHQKVFRNWEK-LKLFVSCMIDDHRK-DWNPDEP-RDFIDAFLKEMT 286

  Fly   308 E--DKDVS---RNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSI 367
            :  :|..|   .|.|...|:.|..|.......:...|.|:|...::..::|.|||.:|.:: |:.
Mouse   287 KYPEKTTSFNEENLICSTLDLFFAGTETTSTTLRWALLYMALYPEVQEKVQAEIDRVIGQK-RAA 350

  Fly   368 NLLDMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWV 430
            .|.|..:||||.|.|.||.|..: .|: ||.....||.::|:.:.|||:|..|...|:...|.|.
Mouse   351 RLADRESMPYTNAVIHEVQRMGNIIPLNVPREVAMDTNLNGFHLPKGTMVLTNLTALHRDPKEWA 415

  Fly   431 NPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFG 495
            .|..|||..|||..                      |.|:. ..|||||:|||.|:|:.|.|...
Mouse   416 TPDVFNPEHFLENG----------------------QFKKR-ESFLPFSMGKRACLGEQLARSEL 457

  Fly   496 FLVVVNVMQRYNISSHNPSTIKISPE---SLALPADCFPLVLTPRE 538
            |:...::||::..:.  |...|:||:   .|.|......:...||:
Mouse   458 FIFFTSLMQKFTFNP--PINEKLSPKFRNGLTLSPVSHRICAVPRQ 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 127/448 (28%)
Cyp2j6NP_034138.3 CYP2J 75..495 CDD:410755 132/464 (28%)

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