DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp2c40

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_034134.3 Gene:Cyp2c40 / 13099 MGIID:1306815 Length:491 Species:Mus musculus


Alignment Length:502 Identity:142/502 - (28%)
Similarity:224/502 - (44%) Gaps:96/502 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAG--FTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNG 118
            |||.|.|||||.||:| .:|   .|  .|..::.||.:::|.||....:|::..|.|:|.|..:|
Mouse    31 PGPTPLPIIGNYHLID-MKD---IGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHG 91

  Fly   119 KVMSGRP-----DFIRYHKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIG 178
            :..|||.     |.:...|..|....|.     |.              :.|.|:...::...:|
Mouse    92 EEFSGRGRIPVFDKVSTGKGIGFSHGNV-----WK--------------ATRVFTVNTLRNLGMG 137

  Fly   179 CEEMEHWNRELGNQLVP------GEPINIKPLILKACA--NMFSQYMCSLRFDYDDVDFQQIVQY 235
            ...:|:..:|....|:.      |.|.:  |..:..||  |:....:...||||.|.||..::..
Mouse   138 KRTIENKVQEEAQWLMKELKKTNGSPCD--PQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGK 200

  Fly   236 FDE-----------IFWEINQGHPLDFLPWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSV 289
            .:|           ||         :.:|.|..:.....||:....:.|:.:::.:|..|.| |:
Mouse   201 VNECTEILSSPGCQIF---------NAVPILIDYCPGSHNKLFKNHTWIKSYLLGKIKEHEE-SL 255

  Fly   290 DLDEPDRDFTDALL-----KSLLEDKDVSRNTIIFMLEDFI-GGHSAVGNLVMLVLAYIAKNVDI 348
            |:..| |||.|..|     |:.:|..|.:...:..::.|.: ||...:.:.:...|..:.|:..|
Mouse   256 DVTNP-RDFIDYFLIQRRQKNGIEHMDYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHI 319

  Fly   349 GRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRY-SSSPI-VPHVATEDTVISGYGVTK 411
            ..::|||||.:| ..:||..:.|.|.||||.|.:.||.|| ...|. |.|..|.||....|.:.|
Mouse   320 TAKVQEEIDNVI-GRHRSPCMQDRNHMPYTNAMVHEVQRYIDLGPNGVVHEVTCDTKFRNYFIPK 383

  Fly   412 GTIVFIN-NYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHF 475
            ||.|..: ..||:.|.:| .||:.|:|..||:.:     .|.|.||                 :|
Mouse   384 GTQVMTSLTSVLHDSTEF-PNPEVFDPGHFLDDN-----GNFKKSD-----------------YF 425

  Fly   476 LPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISS-HNPSTIKISPE 521
            :|||.|||.|:|::|.|...||.:..::|.:.:.. .:|..|.::|:
Mouse   426 VPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDMTPK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 125/464 (27%)
Cyp2c40NP_034134.3 CYP2C-like 61..485 CDD:410758 127/468 (27%)

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