DRSC/TRiP Functional Genomics Resources

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Protein Alignment spo and Cyp1a1

DIOPT Version :10

Sequence 1:NP_647975.2 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_034122.1 Gene:Cyp1a1 / 13076 MGIID:88588 Length:524 Species:Mus musculus


Alignment Length:533 Identity:150/533 - (28%)
Similarity:233/533 - (43%) Gaps:89/533 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VLATSYICIIYGVKR--RVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDRYRDSPF 78
            :||.:..|:.:.|.|  |...|...|.              .|||...|.||::..:.:   :|.
Mouse    17 LLAVTVFCLGFWVVRATRTWVPKGLKT--------------PPGPWGLPFIGHMLTVGK---NPH 64

  Fly    79 AGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGERSNSLA 143
            ...|.|:|||||:..:..|.|..:|::.|..|::.|.:.|....||||...:..:..|:   |:.
Mouse    65 LSLTRLSQQYGDVLQIRIGSTPVVVLSGLNTIKQALVRQGDDFKGRPDLYSFTLITNGK---SMT 126

  Fly   144 L-CDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLVP---------GEP 198
            . .|...:...||.||:.  :.:.||......|...|...||.::| .|.||.         |..
Mouse   127 FNPDSGPVWAARRRLAQN--ALKSFSIASDPTSASSCYLEEHVSKE-ANYLVSKLQKVMAEVGHF 188

  Fly   199 INIKPLILKA----CANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEI-NQGHPLDFLPWLYPF 258
            ...|.|::..    ||..|.|     |:|:||.:...||...:| |.|: ..|:|.||:|.|...
Mouse   189 DPYKYLVVSVANVICAICFGQ-----RYDHDDQELLSIVNLSNE-FGEVTGSGYPADFIPVLRYL 247

  Fly   259 YQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDKDVSRN-------- 315
            ....|:...:.:.....| |:::|:....:.:... .||.||:|::. .:|:.:..|        
Mouse   248 PNSSLDAFKDLNDKFYSF-MKKLIKEHYRTFEKGH-IRDITDSLIEH-CQDRKLDENANVQLSDD 309

  Fly   316 -TIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTM 379
             .|..:|:.|..|...|...:...|.|:..|..:.|:||||:|.:|..: |...|.|...:||..
Mouse   310 KVITIVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRD-RQPRLSDRPQLPYLE 373

  Fly   380 ATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLE 442
            |.|.|..|:|| .|. :||..|.||.::|:.:.||..||:|.:.:|...:.|.:|.||.|.|||.
Mouse   374 AFILETFRHSSFVPFTIPHSTTRDTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPNEFRPERFLT 438

  Fly   443 PSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYN 507
            ||.....:.|           ||:.|         |.:|||.|||:.:.|...||.:..::|:..
Mouse   439 PSGTLDKRLS-----------EKVTL---------FGLGKRKCIGETIGRSEVFLFLAILLQQIE 483

  Fly   508 ISSHNPSTIKISP 520
                    .|:||
Mouse   484 --------FKVSP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_647975.2 CYP1_2-like 89..520 CDD:410710 128/456 (28%)
Cyp1a1NP_034122.1 Mitochondrial targeting signal. /evidence=ECO:0000250|UniProtKB:P00185 33..44 3/24 (13%)
CYP1A 74..509 CDD:410769 131/459 (29%)

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