DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spo and Cyp2c50

DIOPT Version :9

Sequence 1:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_598905.2 Gene:Cyp2c50 / 107141 MGIID:2147497 Length:490 Species:Mus musculus


Alignment Length:525 Identity:144/525 - (27%)
Similarity:225/525 - (42%) Gaps:110/525 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKV 120
            |||.|.|||||: |....:|. ...||.|::.||.:|:|..|....:|::..|.::|.|..:|:.
Mouse    31 PGPTPLPIIGNI-LQINVKDI-CQSFTNLSKVYGPVYTLYLGRKPTVVLHGYEAVKEALVDHGEE 93

  Fly   121 MSGRPDFIRYHKLFGG-----------ERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKM 174
            .:||.....:.|...|           :.:...:|.....|...:|::..|  ...|..|.    
Mouse    94 FAGRGRLPVFDKATNGMGIIFSKGNVWKNTRRFSLTTLRNLGMGKRSIEDR--VQEEARCL---- 152

  Fly   175 SQIGCEEMEHWNRELGNQLVPGEPINIKPLILKACANMFSQYMCSL----RFDYDDVDFQQIVQY 235
                .||:...|         |.|.:  |..:..||.  ...:||:    ||||.|.||..:::.
Mouse   153 ----VEELRKTN---------GSPCD--PTFILGCAP--CNVICSIIFQDRFDYKDRDFLNLMEK 200

  Fly   236 FDEIF------W-EINQGHP--LDFLPWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDL 291
            .:||.      | ::....|  ||:.|..:       ||:....:.|:.|::|:|..|.| |:|:
Mouse   201 LNEITKIMSTPWLQVCNTFPVLLDYCPGSH-------NKVFKNYACIKNFLLEKIKEHEE-SLDV 257

  Fly   292 DEPDRDFTDAL------------LKSLLEDKDVSRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAK 344
            ..| |||.|..            ||:.||      :..|.:.:.|..|.......:...|..:.|
Mouse   258 TIP-RDFIDYFLINGGQENGNYPLKNRLE------HLAITVTDLFSAGTETTSTTLRYALLLLLK 315

  Fly   345 NVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRYSS--SPIVPHVATEDTVISGY 407
            ...:..::||||:.:|.:..|.. :.|.:.||||.|.|.||.|:..  ...:||..|.|.....|
Mouse   316 YPHVTAKVQEEIEHVIGKHRRPC-MQDRSHMPYTDAMIHEVQRFIDLVPNSLPHEVTCDIKFRNY 379

  Fly   408 GVTKGTIVFIN-NYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRN 471
            .:.|||.|..: :.||..|::| .||::|:|..||:       :|.|...|              
Mouse   380 FIPKGTNVITSLSSVLRDSKEF-PNPEKFDPGHFLD-------ENGKFKKS-------------- 422

  Fly   472 IPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISS-HNPSTIKISPESLAL----PADCFP 531
             .:|:|||.|||.|.|:.|.|...||.:.:::|.:|:.. .:|..|.::|..:.|    ||  |.
Mouse   423 -DYFMPFSTGKRICAGEGLARMELFLFLTSILQNFNLKPLVHPKDIDVTPMLIGLASVPPA--FQ 484

  Fly   532 LVLTP 536
            |...|
Mouse   485 LCFIP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spoNP_001286943.1 p450 56..540 CDD:299894 144/525 (27%)
Cyp2c50NP_598905.2 p450 30..487 CDD:278495 143/521 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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