DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)psg2 and Son

DIOPT Version :9

Sequence 1:NP_647974.1 Gene:l(3)psg2 / 38630 FlyBaseID:FBgn0035617 Length:1929 Species:Drosophila melanogaster
Sequence 2:NP_001262426.1 Gene:Son / 41159 FlyBaseID:FBgn0037716 Length:874 Species:Drosophila melanogaster


Alignment Length:1078 Identity:209/1078 - (19%)
Similarity:341/1078 - (31%) Gaps:341/1078 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GSAVGMEQPATGKQLKPPEDLQDNDTNSLEPGEVVTPPHYHPSSPAVKKHLSKELMISKTLR--- 68
            |::|...|.| |.|..||..         ||..:...|      |...|....:..:...||   
  Fly     8 GASVETPQVA-GSQTNPPVQ---------EPLALTKIP------PIKVKSERPDAEVEAKLRAMN 56

  Fly    69 -KLPVSVVEQARKENGSGGTPNAQAEDADDSEGLYSESDSSGEDLKNVEDVQKARKEKQEEAAAA 132
             |:...:|...|:.|.:        |..::.|...|||.:|.:|.||::.|:             
  Fly    57 AKIKAEMVTLMRRSNSN--------ELGNNDESGESESSASADDKKNIKPVK------------- 100

  Fly   133 TLPQAPPTPFLGINPLRFHMRAPCFEFPRMGFMPRMNRGGPRGMRPTFFGRPPAANRMGAPMMGG 197
                                                                 ::|.:.|.:.| 
  Fly   101 -----------------------------------------------------SSNEILAELFG- 111

  Fly   198 LPTQGPPPGAYAPQNPPPTGINSNSGRCKRLQSDVIWTALQPPVSFVFNLVSECSNTKHENCRTK 262
                                               ::.|..|......||..:....|.|....|
  Fly   112 -----------------------------------VFNAAPPEELLDDNLFKKKKKVKKEKKDKK 141

  Fly   263 AETTDHNSKESKLPSETKSTEPLIENNRSRELPQHKNYVRGKTSNRSHDRTQNRGRTRERSKESH 327
            |:    ..|.:|...|...:|...::...|:..:||: :|.|...:..||.:::.:.|:|     
  Fly   142 AK----KKKTTKSDGECSDSEAEGKHKHKRKKHKHKD-IRVKDKEKDRDRDKSKEKDRDR----- 196

  Fly   328 GKSTENSKNKDEGRGKGRERDLFRRKSRERSQDKNLNRAKSMNLSKEKDEVGGEPRNTASGKSQE 392
              .|:.||.||      |:||    :.|::|:||...........|||.|.........|..|::
  Fly   197 --VTDKSKEKD------RDRD----RDRDKSKDKFTAAQAPSEKEKEKSESRKRSAVEPSSHSEK 249

  Fly   393 RDQSRGKTKDRSRERDRTRNKTREKSQARDQTRSKAN----DAEHTRAKSRKRSSSRDKR-REKS 452
            |::     .:|.:.||..|.:.|||...|::.||..:    ..|..|.|..:.:|::.:: ::.|
  Fly   250 RER-----HEREKHRDWEREREREKEHERERVRSNNSFYNGQREADRLKGSESASTKSRQEQDLS 309

  Fly   453 KEKLGDKEK--NEDLSKEKLEGKSTEHSEKRNESKVKNKDTNEENA--NKKLRERSKDRNHSKER 513
            ...|.|:|.  .|..|..:....::.:.||...|....::..|.|.  |:|.|.||:|....|:|
  Fly   310 DISLSDEESYLREKASNGRRRAHNSFYDEKEELSVSPKRNVRESNTRRNRKSRSRSRDLGIDKKR 374

  Fly   514 LHERTQ----------------NKSEERKPE------------------AKKVRNA-----IENS 539
            |.|..:                |.:.|.|.:                  .||:.|.     :.:.
  Fly   375 LLEIARRNAINMFKQGTMPGVANMTAEVKDKVLVKMRYGGRTIQDLTDFCKKISNGDGLSDLSSE 439

  Fly   540 KEAPTDR-----------------------KKDKLLGPLGEKTDERSK---------DKQIKRSR 572
            :|:..|:                       :....|.|...:.||::|         ..|..|:.
  Fly   440 EESDVDKNGNAKVFHHPFQLKEREPIVMHIRNSTALVPAPPRLDEQTKAITMQFPVSSGQTHRNN 504

  Fly   573 EQSVTKCPKESGKDTLMEHPPQENGLDGSKRSSMPHESFSESAKTREHASRRKNQTLSPWGSREG 637
            |..|...||:| ...|...||.:...:..|.:  |...|::|...:|    ::.....|.|....
  Fly   505 EVWVPVDPKDS-LVPLPSLPPAKQATNMFKET--PKNVFAKSIPLQE----QQEPAFKPLGGAVV 562

  Fly   638 TPPMTPPQVQIPQTPIVDIANPKDFDIFADSPPRVNTAVSAPAATIERSTTPPLKSSIPIVPIAK 702
            .||:.  ..|:|..|             ...||           |:.:...||....:|.|||..
  Fly   563 VPPLA--ATQLPTVP-------------QSVPP-----------TVPKEFAPPAVPFVPEVPIPS 601

  Fly   703 ADKLAPLLKASEIHSRIGALLEESDLHLDNLLATKEQLFRRTNEYKERKEAPKEIKAEYLPNSRH 767
            ...:.|:..||     |...:....:.:.:::..:....||..|.....||   :|..|  .::.
  Fly   602 TSPVTPMQSAS-----IFPDVTPPSMDVSSIITQRLSAIRRLQENPADSEA---LKMMY--TAQR 656

  Fly   768 NRSATGRAEVEHHKSQPRHINPFKRESVLSGRKSSSRPSSKERRFQRHDSEVENWDRDLELERNQ 832
            |.|:...:     |..|..........|:...:.:|.|....|:.|...::.......:.|.:..
  Fly   657 NMSSWANS-----KHLPGQFTGSTGAQVMKAHELNSGPQLWVRKDQMTSTKPVTGGMGMALLQKM 716

  Fly   833 -------LNGSQLTGFQPRKSD-EYTKFSIKKEKDLTPPPLQTNFTRTTIKIERN---------- 879
                   |...:....||...| :..|..:....||.||.:     |......||          
  Fly   717 GWKPGEGLGRCKTGSLQPLLLDVKLDKRGLVSRDDLRPPQM-----RAPAAQRRNKNMAGPIGAG 776

  Fly   880 --------------ATP-PRHMEHDVLVRNGAVATN--APPPAKEQESPDTDDYIDNWENDDSLA 927
                          :|| ....:|.|.|.|...:.|  .||..|.::.      |....|...|.
  Fly   777 PCPAVQGAGPGPLASTPLVTQDKHPVCVLNELTSKNKWMPPQYKLRQD------IGPAHNRSFLF 835

  Fly   928 SMPKNAPPVTPTPAPN--ANASLNATP--------LPP 955
            |:..|....||....|  ..|.|||..        |||
  Fly   836 SVEINGQTFTPDRGSNNKKEAKLNAAALCLRSLGILPP 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)psg2NP_647974.1 PRP38_assoc 374..450 CDD:289628 20/80 (25%)
SonNP_001262426.1 PHA03247 <455..627 CDD:223021 40/209 (19%)
G-patch 705..747 CDD:396249 6/41 (15%)
DSRM_SON-like 798..872 CDD:380699 20/79 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BZCQ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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