DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)psg2 and Son

DIOPT Version :9

Sequence 1:NP_647974.1 Gene:l(3)psg2 / 38630 FlyBaseID:FBgn0035617 Length:1929 Species:Drosophila melanogaster
Sequence 2:XP_006248126.1 Gene:Son / 304092 RGDID:1309013 Length:2479 Species:Rattus norvegicus


Alignment Length:1359 Identity:284/1359 - (20%)
Similarity:465/1359 - (34%) Gaps:457/1359 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 RSKDRNHSKER----LHERTQNKSEER---KPEAKK-VRNAIENSKEAPTDRKKDKLLGPLGEKT 559
            ||...:::.||    .:||:. .|.||   .|.|:: :.:|.|.|..:..:|   .::.|:.|::
  Rat   995 RSMMMSYAAERSMMSSYERSM-MSYERSMMSPMAERSMMSAYERSMMSAYER---SMMSPMAERS 1055

  Fly   560 DERSKDKQIKRSREQSVTKCPKESGKDTLMEHPPQENGLDGSKRSSMPHESFSESAKTREHASR- 623
            ...:.::.:..:.|:|:.....:....::.......:....:.||.|...|.::.:....:..| 
  Rat  1056 MMSAYERSMMSAYERSMMSPMADRSMMSMGADRSMMSSYSAADRSMMSSYSAADRSMMSSYTDRS 1120

  Fly   624 ----------------------------RKNQTLSPWGSREGTPPMTPPQVQIPQTPIVDIANPK 660
                                        .:..|:.|....|  ||||||   :|           
  Rat  1121 MMSMAADSYTDSYTDSYTEAYMVPPLPPEEPPTMPPLPPEE--PPMTPP---LP----------- 1169

  Fly   661 DFDIFADSPPR---VNTAVSAPAA--TIERSTTPPLKSSI--PIVPIAKADKLAPLL-----KAS 713
                 .:.||.   ::|..||..|  |.....|.|.:.|:  |..|:::::...||:     .||
  Rat  1170 -----PEEPPEGAALSTEQSALTADNTWSTEVTLPTEESVSQPEPPVSQSEISEPLVVPANYSAS 1229

  Fly   714 EIHSRIGALLEESDLHLDNLLATKEQLFRRTNEYKERKEAPKEIKAEYLPNSRHNRSATGRAEVE 778
            |  |....|..|:.:.:                    .|..:|      |.|....:....|.|.
  Rat  1230 E--SETSMLASEAVMTV--------------------PEPARE------PESSVTSTPVESAVVA 1266

  Fly   779 HHKSQP-RHINPFKRESVLSGRKS--SSRPSSKERRFQRHDSEVENWDRDLELERNQLNGSQLTG 840
            .|:..| |.:.....|:.::...|  :|..|......:.:||...:.....|:..:.|..: :|.
  Rat  1267 EHEMVPERPMTYMVSETTMAAEPSVLTSEASVMAETSETYDSMRPSGHAISEVSMSLLEPA-VTI 1330

  Fly   841 FQPRKSDEYTKFSIKKEKDLTPPPLQTNFTRTTIKIERNATPPRHMEHDVLVRNGAVATNAPPPA 905
            .||.:|      |::......|.|.....|.:.:.:...|               |||.:.||..
  Rat  1331 SQPAES------SLELPSMAVPAPSTIATTESLVAVPELA---------------AVADSEPPIM 1374

  Fly   906 KEQESPDTDDYIDNWENDDSLASMPKNAPPVTPTPAPN-------ANASLNATP-----LPPVAS 958
            ...|.|              ..::|:  ||||..|.|.       .:.|::.:|     ||.:| 
  Rat  1375 AVPEPP--------------TVAVPE--PPVTTAPEPPPMITPELCSLSISESPVAVSELPALA- 1422

  Fly   959 QFNGDDDDDDSNALWNAKSTPP------------------------------------------- 980
                 |.:....|:....|..|                                           
  Rat  1423 -----DPEHAVTAVSGVSSLEPSVPVLEPSVSVLQPVMIVSEPCVSIQEPTVAVSEPAVIVSEHT 1482

  Fly   981 ----PR-------------------RKNENLPEGN-------------IH-------------EL 996
                |.                   .|..||..|:             :|             :|
  Rat  1483 QITSPEMAVESSPVMVESSVVSSQIMKGMNLLSGDENLGSEVGTQETLLHPGEEPHDGGHLKSDL 1547

  Fly   997 Y--------DKFMNS--IKMSNEH----------------------------------------- 1010
            |        |..:||  |....||                                         
  Rat  1548 YEHEYDRNTDLTVNSHLIAKEAEHSTACAAAIVPVGETSEEKILPISETKEMIELDTCPAVSEAD 1612

  Fly  1011 ----------LEPETLDTSKNSSL--SNSPAEESSSGTETSSTSSSSSETEDD---SSSDDDANE 1060
                      ||.:|:.|||....  :::|..||....|.|.|   :.:||.|   |:|....:|
  Rat  1613 VGRSLSSQLALELDTVGTSKGFEFVAASAPISESKYDVEVSVT---TQDTEHDMVISTSPSGGSE 1674

  Fly  1061 SS------SND---ESATTSGNCNTNQDEAAGKEQLQKKNNVSKDLRKLKSLEDNLARIQMMREN 1116
            :.      :.|   :..:|:..|...:|....||   ....|:..|...:|.||....:......
  Rat  1675 ADIEGPLPAKDIHLDLPSTNLVCKDVEDSLPIKE---SDETVTVALSPKESSEDTEGPLPNKEIV 1736

  Fly  1117 YDAG-----DEISE-ELLKMESLFLMQRNAIMDKYRKQELKSNSSEDQQP--VDEQGTVQAQEVV 1173
            .|:|     |||:| :|::.    |:.:    |..|...|::.......|  |:...:|.:..|:
  Rat  1737 PDSGYSVSIDEINEADLVRP----LLPK----DMERLTSLRAGIEGPLLPSEVERDKSVASPVVI 1793

  Fly  1174 KETSFPVNSIFSANREA------IKLTISPLKLTRKSVIFDKDE----ADLPETSKAEPPKQTLQ 1228
               |.|..:..|::.|.      :|:..:..| ::|:...||.|    .|....|:::..|.:..
  Rat  1794 ---SIPERASESSSEEKDDYEIFVKVKDTHEK-SKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEH 1854

  Fly  1229 KPQKEIAIVKPTIVESRSKPKLRSPPPSSGSRRRSRSRSISRSRARRRGSRTKSRTPSPR----- 1288
            |.:|..:       ||||:.:.||   |.....||::||.||||.|||.||::|::...|     
  Rat  1855 KSRKRTS-------ESRSRARKRS---SKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKE 1909

  Fly  1289 -RRRLPSPRRVSRYAKRIGGGAVGGTRKGRSHSRSLTRSRTRSRSPSRRRRLPPAGHRKRGSISP 1352
             |:|.|..|..||..||....:....:..|:.||:.:| |:||.:||||||....|.|:..||||
  Rat  1910 KRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSR-RSRSHTPSRRRRSRSVGRRRSFSISP 1973

  Fly  1353 IPQKLAGPRSPPPSRRRQSLSRDREREHLSRSRSPLPFKPPSPPMRRSWSKARSPTRR---RSFS 1414
                  ..||..||||.::.|| |.|....|||:  |.:....|.|||    |:|:||   ||..
  Rat  1974 ------SRRSRTPSRRSRTPSR-RSRTPSRRSRT--PSRRSRTPSRRS----RTPSRRRRSRSVV 2025

  Fly  1415 RSRSRSISP----RSRLSAEEAFANYFEENQGMEAAAYYYNMSLMQQEDQNALGEGYDAYAAYMD 1475
            |.||.||||    |||......|:.                 |.::::...:...|         
  Rat  2026 RRRSFSISPVRLRRSRTPLRRRFSR-----------------SPIRRKRSRSSERG--------- 2064

  Fly  1476 SAYNMEQAYAQYSEEYSNTYMDYMVEVASSPQAPGSVLRELPMAPMMPVESLAPIAPLEAMPSMA 1540
                      :..:..::.....::|:|.:..|.......:|:.|     :|.|..|......:|
  Rat  2065 ----------RSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPP-----NLKPAPPPTIEEKVA 2114

  Fly  1541 ATASGMPVAVQKGNVLEIVPSGEDILEAEENIV--PDATDKPVED---------TSKPK 1588
            ..:.|..:........:|..|.||    ::.||  |..:|:..|:         .|:||
  Rat  2115 KKSGGATIEELTEKCKQIAQSKED----DDVIVNKPHVSDEEEEEPPFYHHPFKLSEPK 2169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)psg2NP_647974.1 PRP38_assoc 374..450 CDD:289628
SonXP_006248126.1 Forkhead_N 1014..1140 CDD:254796 18/129 (14%)
G-patch 2325..2368 CDD:279867
DSRM 2392..2460 CDD:214634
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BZCQ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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