DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)psg2 and ZC3H13

DIOPT Version :9

Sequence 1:NP_647974.1 Gene:l(3)psg2 / 38630 FlyBaseID:FBgn0035617 Length:1929 Species:Drosophila melanogaster
Sequence 2:NP_001369140.1 Gene:ZC3H13 / 23091 HGNCID:20368 Length:1697 Species:Homo sapiens


Alignment Length:1788 Identity:348/1788 - (19%)
Similarity:590/1788 - (32%) Gaps:598/1788 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KQLKPPEDLQDNDTNSLEPGEVVTPPHYHPSSPAVKKHLSKELMISK-----TLRKLPVSVVEQA 78
            |:.|...:|...:..::|..|.:          .:||.:|.|::.||     :|||         
Human   169 KRQKIQRELMKLEQENMEKREEI----------IIKKEVSPEVVRSKLSPSPSLRK--------- 214

  Fly    79 RKENGSGGTPNAQAEDADDSEGLYSESDSSGEDLKN------VEDVQKARKEKQEEAAAATLPQA 137
                 |..:|..::..        ..|.:|.:|.|.      :.|.|:..|..|.:......|..
Human   215 -----SSKSPKRKSSP--------KSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSP 266

  Fly   138 PPTPFLGINPL------------RFHMRAPCFEFPRMG-------FMPRMNRGGPRGMRPTFFGR 183
            ||       |:            ::.::....|..|.|       ...|..|..||...|.....
Human   267 PP-------PIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHH 324

  Fly   184 PPAANR-MGAPMMGGLPTQGPPPGAYAPQNPPPTGINSNSGRCKRLQSDVIWTALQPPVSFVFNL 247
            .|.::| ..:....|...|...|.....:.|.|:...:.:...:|..|.....:|..|       
Human   325 SPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSP------- 382

  Fly   248 VSECSNTKHENCRTKAETTDH------NSKESKLPSETKSTEPLIENNRSRELPQHKNYVRGKTS 306
            ..:.|..:|.:...:....||      :.:..:...:|:.     :.:|.::..:.:.|.:.::|
Human   383 QRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRG-----KRDREKDSREEREYEQDQSS 442

  Fly   307 NRSH--DRTQNRGR-------TRER-----------SKESHGKSTENSKNKD------------- 338
            :|.|  ||....||       ||:|           |:|....|.:..:::|             
Human   443 SRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPRDSRSTRDAHDY 507

  Fly   339 ---EGRGKGRERDLFRRKSRERSQDKNLNRAKSMNL---SKEKDEVGGEPRNTASGKSQ------ 391
               |||...|:.|.:..:|  ||..:|..|.:|...   ::.::|...|.||...|:|:      
Human   508 RDREGRDTHRKEDTYPEES--RSYGRNHLREESSRTEIRNESRNESRSEIRNDRMGRSRGRVPEL 570

  Fly   392 ------------------------------------------ERDQSRGKTKDRSR-ERDRTRNK 413
                                                      .|||:|..:.:|.. ||||..|:
Human   571 PEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRDQARDSSFERRHGERDRRDNR 635

  Fly   414 TR---------------------------------------------EKSQARDQTR-SKANDAE 432
            .|                                             |:.:.|::.| .:.:|..
Human   636 ERAPMFYTSCCPYPLPPVFSGPAGGTEKIRDQRPSSPIRHQGRNDELERDERREERRVDRVDDRR 700

  Fly   433 HTRAKSRKRSSSRDKRREKSKEKLGDKEKNEDLSKEKLEGKSTEHSEKRNESKVKNKDTNEENAN 497
            ..||:.|.|...||:.||:.:|:..|:|:.::...|:      |.:.:|...:.|.:|       
Human   701 DERARERDRERERDRERERERERERDREREKERELER------ERAREREREREKERD------- 752

  Fly   498 KKLRERSKDRNHSKERLHERTQNKSEERKPEAKKVRNAIENSKEAPTDRKKDKLLGPLGEKTDER 562
               |||.:||:|.:||..||.:::.:||:.|.::.....|..:|...:|::::      |:..||
Human   753 ---RERDRDRDHDRERERERERDREKEREREREERERERERERERERERERER------ERARER 808

  Fly   563 SKDKQIKRSREQSVTKCPKESGKDTLMEHPPQENGLDGSKRSSMPHESFSESAKTREHASRRKNQ 627
            .|:::.:|..|.      |:.|:|...|           ||     |...|....|:....||::
Human   809 DKERERQRDWED------KDKGRDDRRE-----------KR-----EEIREDRNPRDGHDERKSK 851

  Fly   628 TLSPWGSREGTP-PMTPPQVQIPQTPIVDIANPKDFDIFADSPPRVNTAVSAPAATIERSTTPPL 691
            ...   ..||:| |...|:.:...:|..|..|..|   ..:...|:.:.|..|..:  ||.:|  
Human   852 KRY---RNEGSPSPRQSPKRRREHSPDSDAYNSGD---DKNEKHRLLSQVVRPQES--RSLSP-- 906

  Fly   692 KSSIPIVPIAKADKLAPLLKASEIHSRIGALLEESDLHLDNLLATKEQLFRRTNEYKERKEAPKE 756
                                :.....|.|...||     |.....||.  .|..|.:|.||....
Human   907 --------------------SHLTEDRQGRWKEE-----DRKPERKES--SRRYEEQELKEKVSS 944

  Fly   757 I-----KAEYLPNSRHNRSATGRAE--VEHHKSQPRHINPFKRESVLSGRKSSSRPSSKERRFQR 814
            :     :.|.|.:||.      ||:  :.||:|:.|..:....:......|...:|..|::    
Human   945 VDKQREQTEILESSRM------RAQDIIGHHQSEDRETSDRAHDENKKKAKIQKKPIKKKK---- 999

  Fly   815 HDSEVENWDRDLELERNQLNGSQLTG--FQPRKSDEYTKFSIKKEKDLTPPPLQTNFTRTTIKIE 877
                    :.|:.:||..:..:...|  |.|:|..:......|::|......:.........|.:
Human  1000 --------EDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKKSKGDSDISDEEAAQQSKKK 1056

  Fly   878 RN-ATPPRHMEHDVLV----RNGAVATNAPPPAKEQESPDTDDYIDNWENDD-----SLASMPKN 932
            |. .|||...:.:::.    :||.:         |......|....:|.::|     .:......
Human  1057 RGPRTPPITTKEELVEMCNGKNGIL---------EDSQKKEDTAFSDWSDEDVPDRTEVTEAEHT 1112

  Fly   933 APPVTPTPAPNANASLNATPLPPVASQFNGDDDDDDSNALWNAKSTPPPRRKNENLPEGNIHELY 997
            |...||...|:..:||    |||                       |||                
Human  1113 ATATTPGSTPSPLSSL----LPP-----------------------PPP---------------- 1134

  Fly   998 DKFMNSIKMSNEHLEPETL---DTSKNSSLSNSPAEESSSGTETSSTSSSSS------------- 1046
                  :..:.....|.||   ..:..:|.|.|....|:|.|.|::|:::.:             
Human  1135 ------VATATATTVPATLAATTAAAATSFSTSAITISTSATPTNTTNNTFANEDSHRKCHRTRV 1193

  Fly  1047 -ETEDDSSSDDDANESSSNDESATTS-GNCNTNQDEAAGKEQLQKKNNVSKDLRKLKSLEDNLAR 1109
             :.|....:.:||......|:..::| |:..:|:...:|               :|:|..::.| 
Human  1194 EKVETPHVTIEDAQHRKPMDQKRSSSLGSNRSNRSHTSG---------------RLRSPSNDSA- 1242

  Fly  1110 IQMMRENYDAGDEISEELLKMESLFLMQRNAIMDKYRKQELKSNSSEDQQPVDEQGTVQAQEVVK 1174
                   :.:||:.|.                    ||:.|.|.|.:                  
Human  1243 -------HRSGDDQSG--------------------RKRVLHSGSRD------------------ 1262

  Fly  1175 ETSFPVNSIFSANREAIKLTISPLKLT--RKSVIFDKDEADLPETSKAEPPKQTLQKPQKEIAIV 1237
                         ||..|    .|::|  |||.|        .:..:.||.:.|....|      
Human  1263 -------------REKTK----SLEITGERKSRI--------DQLKRGEPSRSTSSDRQ------ 1296

  Fly  1238 KPTIVESRSKPKLRSPPPSSGSRRRSRSRS---ISRSRARRRGSRTKSRTPSPRRRRLPSPRRVS 1299
                 :|||....||.|.|.   |:..|||   .||.|.:.| .|.:......|.||....|...
Human  1297 -----DSRSHSSRRSSPESD---RQVHSRSGSFDSRDRLQER-DRYEHDRERERERRDTRQREWD 1352

  Fly  1300 RYAKRIGGGAVGGTRKGRSHSRSLTRSRTRSRSPSRRRRLPPAGHRKRGSISPIPQKLAGPRSPP 1364
            |.|.:         ...|:..|...|.|.|.|...:||.|    .|:|       ::|..     
Human  1353 RDADK---------DWPRNRDRDRLRERERERERDKRRDL----DRER-------ERLIS----- 1392

  Fly  1365 PSRRRQSLSRDREREHLSRSRSPLPFKPPS-PPMRRSWSKARSPTRRRSFSRSRSRSISPRSRLS 1428
                 .|:.|||:|:   |.|:   |:... ..::|..:|......|...|.||......:.|:.
Human  1393 -----DSVERDRDRD---RDRT---FESSQIESVKRCEAKLEGEHERDLESTSRDSLALDKERMD 1446

  Fly  1429 AEEAFANYFEENQGMEAAAYYYNMSLMQQEDQNAL----------GEGYDAYA-AYMDS--AYNM 1480
            .:......|||....|...     ||...:|::.|          ||||:..: ..:|.  |.:.
Human  1447 KDLGSVQGFEETNKSERTE-----SLEAGDDESKLDDAHSLGSGAGEGYEPISDDELDEILAGDA 1506

  Fly  1481 EQAYAQYSEEYSNTYMD--------YMVEVASSPQAPG-SVLRELPMAPMMPVESLAPIAPLEAM 1536
            |:...|..||.....:|        .|.:....|:.|| ::|:..|.|.|:.|.....:|..|..
Human  1507 EKREDQQDEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALLKFTPGAVMLRVGISKKLAGSELF 1571

  Fly  1537 PSMAATASGMPVAVQKGNVLEIVPSGEDILEAE 1569
            ..:..|..         .:||.....:::.|.|
Human  1572 AKVKETCQ---------RLLEKPKDADNLFEHE 1595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)psg2NP_647974.1 PRP38_assoc 374..450 CDD:289628 27/170 (16%)
ZC3H13NP_001369140.1 zf-CCCH 42..63 CDD:395517
PRK12678 343..>566 CDD:237171 46/236 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7619
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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