Sequence 1: | NP_647974.1 | Gene: | l(3)psg2 / 38630 | FlyBaseID: | FBgn0035617 | Length: | 1929 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001353524.1 | Gene: | SRRM1 / 10250 | HGNCID: | 16638 | Length: | 918 | Species: | Homo sapiens |
Alignment Length: | 1295 | Identity: | 265/1295 - (20%) |
---|---|---|---|
Similarity: | 400/1295 - (30%) | Gaps: | 476/1295 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 434 TRAKSRKRSSSRDKRREKSKEKLGDKEKNEDLSKEKLE-------GKSTEHSEKR---------N 482
Fly 483 ESKVKNKDT-----------NEENANKKLRERSKDRNHSKERLHERTQNKSEERKPEAKKVRNAI 536
Fly 537 ENSKEAPTDRKKDKLLGPLGEKTDERSKDKQIKRSREQSVTKCPKESGKDTLMEHPPQENGLDGS 601
Fly 602 KRSSMPHESFSESAKTREHAS-----RRKNQTLSPWGSREGTPPMTPPQVQIPQTPIVDIANPKD 661
Fly 662 FDIFADSPPRVNTAVSAPAATIERSTTPPLKSSIPIVPIAKADKLAPLLKASEIHSRIGALLEES 726
Fly 727 DLHLDNLLATKEQLFRRTNEYKERKEAPKEIKAEYLPNSR---HNRSATGRAEVEH------HKS 782
Fly 783 QPRHINPFKRESVLSGRKSSSRPSSKER----------RFQRHDSEVENWDRDLELERNQLNGSQ 837
Fly 838 LTGFQPRKSDEYTKFSIKKEKDLTPPPLQTNFTRTTIKIERNATPPRHMEHDVLVRNGAVATNAP 902
Fly 903 PPAKEQESPDTDDYIDNWENDDSLASMPKNAPPVTPTPAPNANASLNATPLPPVASQFNGDDDDD 967
Fly 968 DSNALWNAKSTPPPRRKNENLPEGNIHELYDKFMNSIKMSNEHLEPETLDTSKNSSLSNSPAEES 1032
Fly 1033 SSGTETSSTSSSSSETEDDSSSDDDANESSSNDESATTSGNCNTNQDEAAGKEQLQKKNNVSKDL 1097
Fly 1098 RKLKSLEDNLARIQMMRENYDAGDEISEELLKMESLFLMQRNAIMDKYRKQELKSNSSEDQQPVD 1162
Fly 1163 EQGTVQAQEVVKETSFPVNSIFSANREAIKLTISPLKLTRKSVIFDKDEADLPETSKAEPPKQTL 1227
Fly 1228 QKPQKEIAIVKPTIVESRSKPKLRSPPPSSGSRRRSRSRSISRSRARRRGSRTKSRTPS-PRRRR 1291
Fly 1292 LPSPRRVSRYAKRIGGGAVGGTRKGRSHSRSLTRSRTRSRSPSRRRRLPPAGHRKRGSISPIPQK 1356
Fly 1357 LAGPRSPPP--------SRRRQSL-SRDREREHLSRS----RSPLPFK--PPSPPMRRSWSKARS 1406
Fly 1407 PTRRRSFSRSRSRSISPRSRLSAEEAFANYFEENQGMEAAAYYYNMSLMQQEDQNALGEGYDAYA 1471
Fly 1472 AYMDSAYNMEQAYAQYSEEYSNTYMDYMVEVASSPQAPGSVLRELPMAPMMPVESLAPIAPLEAM 1536
Fly 1537 PSMAATASGMPVAVQKGNVLEIVPSGEDILEAEENIVPDATDKPVEDTSKPKGKGVNF-VDKVLP 1600
Fly 1601 AYESDNEDRAVVEMAVKRALRKYHESRSQAAAKLQLIRDELLLLPPPPPPPLTTKPANLE 1660 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
l(3)psg2 | NP_647974.1 | PRP38_assoc | 374..450 | CDD:289628 | 5/15 (33%) |
SRRM1 | NP_001353524.1 | Necessary for mRNA 3'-end cleavage and cytoplasmic accumulation | 1..156 | 39/161 (24%) | |
Necessary for DNA and RNA-binding | 1..151 | 36/156 (23%) | |||
PWI | 46..115 | CDD:396183 | 12/68 (18%) | ||
PHA03307 | <620..>754 | CDD:223039 | 44/165 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.960 |