DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment frm and LOC3291353

DIOPT Version :10

Sequence 1:NP_001137887.1 Gene:frm / 38624 FlyBaseID:FBgn0035612 Length:1180 Species:Drosophila melanogaster
Sequence 2:XP_061515262.1 Gene:LOC3291353 / 3291353 VectorBaseID:AGAMI1_007434 Length:486 Species:Anopheles gambiae


Alignment Length:597 Identity:127/597 - (21%)
Similarity:175/597 - (29%) Gaps:261/597 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YYSSNIDTNAYRYGYDVGKTGN-FHHETRGPDGVTYGCYGLIDPYHLLRATHYVADAHGYRTVEP 107
            |:..:...|.:.|||.|.:|.: |.|:.:|||.|||||||.|||.......:|:||..|||.:.|
Mosquito    35 YHEQSFGKNEFNYGYQVERTNSQFQHKVKGPDDVTYGCYGYIDPVGEKHLVYYIADRLGYRLLAP 99

  Fly   108 EKPVETFPPHLYSETN------GGPSEPGIVLQWEELYFPIGCGKFANGAQHGVPFFLDDFKNKG 166
            ::|.:.|...:.:..|      .|......|:.|.:||.|..|.:.                   
Mosquito   100 DQPTKVFTDRVANSVNKLDADLQGRKLDEKVVAWNDLYLPSTCRRL------------------- 145

  Fly   167 GSNDAIPSFSANTIVIKGSDQKSLPIHKPTGPLVPQGTGIFGTDKGHSDLSHPGDQAPSFHSVNT 231
               |.|.|.                    |.|                    |...||       
Mosquito   146 ---DEIVSI--------------------TPP--------------------PTTAAP------- 160

  Fly   232 LLPGSNNDGQYVPDSNPYVHVIGPNGGNGGNGGSGSGGGFGGNGGFGGVGGFGPNGPGGPNGPKG 296
                                |:.|..|             |.||.|.             ||   
Mosquito   161 --------------------VLPPVNG-------------GANGDFS-------------NG--- 176

  Fly   297 PKGPPGPPGPPGGLGPVGAGGGASGKPVYKDGDRTGLGDGS-GNGSGDRISTGNGGGAGAGDRYI 360
                      |.|.||:    |.|.:||         |.|| |:.|||.....|..|..:.:   
Mosquito   177 ----------PNGAGPI----GTSQRPV---------GSGSAGSSSGDHQDDNNNNGGSSSE--- 215

  Fly   361 SGNGGGVGAGDRYVTGN---GGGVGAGDRYTTGNGGAAGSGDRYTAGNGG--------------R 408
            .|....:...:.....|   .||:.:..  ||.|  .:|:|.:.|..:|.              |
Mosquito   216 VGKLPTIPVVEESTQSNLSISGGIPSST--TTDN--PSGNGQKETNDHGKGSEEIKDLPSSDLLR 276

  Fly   409 YNTGNGGAVGGDRTGTGAASGF-----GIEASGQYRPDN---EGTY---TST-------YTHTET 455
            ..|.:..::......|.:....     ...|..|..|.|   ..||   |||       .....|
Mosquito   277 STTVHSVSIASTTPNTPSVQNVTPPHEPTPAPKQIDPVNIPPRTTYLPITSTPRSPIIRVPDQPT 341

  Fly   456 GFPGAIPYTPD--------NGKYNGNG-GRYNG----INDGRYYHDDSGK--------------- 492
            ..|...|..|:        ..||.|:. .::||    ||..   .||||:               
Mosquito   342 PLPANTPSQPNCRSDSSGPRPKYPGSTIAQFNGFVFPINRN---CDDSGRNTADLLAQMQTLNEM 403

  Fly   493 ------------------------------YVHVEGPTGPPAPPYVHVVGP--EGGFGGNGGKGD 525
                                          .::::.|.  |...||.::.|  :||....||   
Mosquito   404 VLKVSNTLHALVETDRNRAAANETCERVLELLNIQQPV--PLLVYVPIMVPYLDGGIQHGGG--- 463

  Fly   526 GGGVGPGGPGGP 537
            ||||.|  |..|
Mosquito   464 GGGVQP--PVNP 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
frmNP_001137887.1 Chitin_bind_4 54..102 CDD:459790 23/48 (48%)
rne <1048..1175 CDD:236766
LOC3291353XP_061515262.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.