DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkr and TkR86C

DIOPT Version :9

Sequence 1:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001097741.1 Gene:TkR86C / 41286 FlyBaseID:FBgn0004841 Length:555 Species:Drosophila melanogaster


Alignment Length:562 Identity:142/562 - (25%)
Similarity:243/562 - (43%) Gaps:114/562 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LIEQESRLEFLPGAEE---EAEF---ERLYAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATT 63
            :|:....||.:..|::   |..|   .|.|..|.|...:.:|.:|.:..||:.||.:|:|:|...
  Fly    47 IIDNRDNLESINEAKDFLTECLFPSPTRPYELPWEQKTIWAIIFGLMMFVAIAGNGIVLWIVTGH 111

  Fly    64 RQMRTVTNMYIANLAFADVII-GLFCIPFQFQAALLQSWNLPWFMCSFCPFVQALSVNVSVFTLT 127
            |.||||||.::.||:.||::: .|.|: |.|...|...|......|:...||..::|:.|||||.
  Fly   112 RSMRTVTNYFLLNLSIADLLMSSLNCV-FNFIFMLNSDWPFGSIYCTINNFVANVTVSTSVFTLV 175

  Fly   128 AIAIDRHRAIINPLRARPTKFVSKFIIGGIWMLALLFAVPFAIAFRVEELTERFRENNETYN-VT 191
            ||:.||:.||::||:.|.::...:.|:..||.|:.:.:.|..:...:  :|:.:      || .:
  Fly   176 AISFDRYIAIVHPLKRRTSRRKVRIILVLIWALSCVLSAPCLLYSSI--MTKHY------YNGKS 232

  Fly   192 RPFCM--------NKNLSDDQLQSFRYTLVF--VQYLVPFCVISFVYIQMAVRLWGTRAPGNAQD 246
            |..|.        ..:::|     :.|.|:.  :.|.:|..|:...|..|...|||:|:.|...|
  Fly   233 RTVCFMMWPDGRYPTSMAD-----YAYNLIILVLTYGIPMIVMLICYSLMGRVLWGSRSIGENTD 292

  Fly   247 SRDITLLKNKKKVIKMLIIVVIIFGLCWLPLQLYNILYVTIPEINDYHFISIVWFCCDWLAMSNS 311
             |.:..:|:|:||::|.|.:|.||.:||||..|:.|......::....::..::....||||||:
  Fly   293 -RQMESMKSKRKVVRMFIAIVSIFAICWLPYHLFFIYAYHNNQVASTKYVQHMYLGFYWLAMSNA 356

  Fly   312 CYNPFIYGIYNEKFKREFNKRFAACFC------KFKT--SMDAHERTFSMHTRAS-SIRSTYANS 367
            ..||.||...|::|:..| :|...|.|      :|.:  |...::.:.:.|||.. ::..:..||
  Fly   357 MVNPLIYYWMNKRFRMYF-QRIICCCCVGLTRHRFDSPKSRLTNKNSSNRHTRGGYTVAHSLPNS 420

  Fly   368 SMRIRSNLFGPARGGVNNGKPGLHMPRVHGSGANSGIYNGSSGQNNNVNGQHHQHQSVVTFAATP 432
            |......|.......:...||...:...|.|                                 |
  Fly   421 SPPTTQTLLAVLAQTLTQPKPQTQLLLSHHS---------------------------------P 452

  Fly   433 GVSAPGVGVAMPPWRRNNFKPLHPNVIECEDDVALMELPSTTPPSEELAS------GAGVQLALL 491
            ..:.|........|:|:..            :..:.:.|.|:...|:.::      |:|.     
  Fly   453 HPTQPSAAETKSQWKRSTM------------ETQIQQAPVTSSCREQRSAQQQQPPGSGT----- 500

  Fly   492 SRESSSCICEQEFGSQTECDGT----CI-----LSEVSRVHL 524
            :|.:..||.|:      ..||:    |:     :.|..||.:
  Fly   501 NRAAVECIMER------PADGSSSPLCLSINNSIGERQRVKI 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LkrNP_647968.3 7tm_4 46..329 CDD:304433 94/294 (32%)
7tm_1 52..318 CDD:278431 88/277 (32%)
PHA03216 467..>519 CDD:177558 12/66 (18%)
TkR86CNP_001097741.1 7tm_4 92..376 CDD:304433 95/299 (32%)
7tm_1 100..363 CDD:278431 88/277 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459149
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D72009at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X257
54.750

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