DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lkr and LOC100535282

DIOPT Version :9

Sequence 1:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_009294045.1 Gene:LOC100535282 / 100535282 -ID:- Length:344 Species:Danio rerio


Alignment Length:379 Identity:70/379 - (18%)
Similarity:143/379 - (37%) Gaps:98/379 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ERLYAAPAEIVALLSIFYGGISIVAVIGNTLVIWVV--ATTRQ--MRTVTNMYIANLAFADVIIG 85
            :|..::|..|.     ||..:.::..:||:|||.||  ...|:  :...:::.:.|:|.:::::.
Zfish    12 QRALSSPLYIA-----FYVILVLLGNLGNSLVIGVVGEGLLREPGVARSSDIILVNMALSNLMVS 71

  Fly    86 ------LFCIPFQFQAALLQSWNLPWFMCSFCPFVQAL-----SVNV-SVFTLTAIAIDRHRAII 138
                  |.......|..|.::|         |.|:..:     |.|| |.|.|:|......|.:.
Zfish    72 LTRNSLLVISDMGVQVFLNRNW---------CRFMMGIWVWVRSANVWSTFFLSAFHFQTLRRVA 127

  Fly   139 NPLR------ARPTKFVSKFIIGGIWMLALLFAVPFAIAFRVEELTERFRENNE---------TY 188
            .|:.      ..|...:  |.:..||.|.|::::|..|          |.:|.:         ..
Zfish   128 PPVSNVHGHPGPPRSLI--FGLCLIWSLNLIYSIPAFI----------FSKNGDANSTETLMLVS 180

  Fly   189 NVTRPF--CMNKNLSDDQLQSFRYTLVFVQYLVPFCVISFVYIQMAVRLW----GTRAPGNAQDS 247
            :.|||.  |:....|.....:|..:.:.:...:|.|::|...:...:.|:    ..||...:.|:
Zfish   181 STTRPLLGCIWNFPSAYSGLAFATSSMILHESIPICLMSITNMGSLLALYAHGEARRAAKKSSDA 245

  Fly   248 RDITLLKNKKKVIKMLIIVVIIFGLCWLPLQLYNILYVTIPEINDYHFISIVWF------CCDWL 306
            ..::.:..:::..|:::.:.|:|.|.|                 ....||:.:|      ..|||
Zfish   246 PVVSRIPAERRAAKVILALNILFILSW-----------------GTSVISVNYFNYNRGSSTDWL 293

  Fly   307 AMSNSCYN-------PFIYGIYNEKFKREFNKRFAACFCKFKTSMDAHERTFSM 353
            .::....|       |.:..:.:.:.     :.|.|.......::..|..|:.:
Zfish   294 LIAARIGNITFIALSPIVLAVGHRRL-----RAFLASILTHSIALCRHLWTYKL 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LkrNP_647968.3 7tm_4 46..329 CDD:304433 61/332 (18%)
7tm_1 52..318 CDD:278431 61/315 (19%)
PHA03216 467..>519 CDD:177558
LOC100535282XP_009294045.1 7tm_1 34..272 CDD:278431 52/258 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4219
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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